Agrobacterium tumefaciens Ach5: Ach5_44720
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Entry
Ach5_44720 CDS
T03816
Name
(GenBank) hemagglutinin
Organism
atf
Agrobacterium tumefaciens Ach5
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
Big_3_5
Ig_SIBA-E_2nd
Cadherin_5
fn3
DUF7507
Y_Y_Y
K319L-like_PKD
Ig_DSCAM-DSCAML_C
LtfC
Motif
Other DBs
NCBI-ProteinID:
AKC10245
LinkDB
All DBs
Position
linear:complement(1970999..1975486)
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AA seq
1495 aa
AA seq
DB search
MGGRLSSWKVAAGRAVSCLHTISRTGAIALSLLLVIVTQALAQSVTVSAVPATFNGLGDN
IRFDYVIDPGSYTITSINPTTTSIKGAVVSCPSVGSGLEWPNKLTCTAAYRVDELDVMAG
QFSDFASFSGTRVGGHSFSFTSNTLVVRAVAGGPVVLSVTSSPNPSLPGQEVEVTATVSS
MGCNAGQSPPGSVSISVGSQSANLGLAPTGPVSPASSATFRTTSLSSGTYPVSASYTGGS
GCSTSSASGSNHTVETKPTVTINQATAQADPTSRSPILFDVAFDKPIVGFSGADVQLSGT
AGAATATISGSGATYQVAVSGMNRAGTVVATIPAGSVTTPAGLANEASTSSDNSVSYDPV
KITPVAIADPAYQQVYGPVGLTASGGSAPHSFAVSAGTLPGGLSLSSNGELTGIPTQTGN
FSFTVTATDSDGATGEHSYSVSIAAPVIDISPTSIPNATYDIAYNQTLTASGGSSPHSFS
VSTGSLPPGLSLAGSGELSGTPILSGTYNFTVTASDVNGQTGSRAYSISVAFTLPDAPVG
LMATAGDTQAAVSFQPPPRNGGVAITGYIVTATPADVAPVAGGNSPIVVTGLTNGQSYTF
TVTAENAAGQSVASVQSNSVTPKASQTLTFNNPGPQTFGTTPTLTASSDSGLTPIFTSVT
TGTCTITSSGLLTFVSTGTCTINADQPGDSDYLPASQITRSFTVNPQAPVANAVSVSVAH
DSSDNVIALNVTGGDPASVAIATAPSNGNATATGTMITYTPRPAYTGQDSFTYTATNVSG
VSAPATVTVLVTATTLVFSPSAGRLTDAFVDMPYSQTVTVSGGNAPYQYTSSGALPDGLN
LNSATGEITGNPTTEGNASFNITARDTNGVTASAAYTIAVLVAAPVASDSTVTVVADSTG
NPVPLGISGGRLDTIAVITGPSHGTVSVIGTSVTYTPNSGYSGTDSFTYSARNSSGNSSA
TVTITVTPPAGALALSPAGGALTEAMAGEAYSQSITASGGTNPLLYSLAGGTLPKGMILN
LSTGELTGPLETETEGDYSFTVQVRDARGATAAAAYTLKVKTREINVANREISVAPGATP
PNINLATGATGGPFTGADLTFVSPANAGRASIVNGEFAQAGGTQATGLYLKFIPNPAFSG
QARVGFRLVSALGASNEGTVTYNLGYDAAQVADEINDLVHGFVRARQNIIASTIKVPGLL
ERRQMVNATSAVTSRAMPSGEGMVLSFATSLAQIEAARNNADGVTRTEMPLFNIWLDGSF
LVHNRDESGSKWGSFAMVSAGVDYLLSDKAMLGFSFHFDRMTDPTNGDNELTGNGWLLGP
YASFEIARSVFWDSSLLYGGSANDIDTPFWDGSFDTSRWLFDTSISGRWDINDVTTFTPR
FRGVYLSETIENYTVGNDVGDLIELRGFKEEQLRVSLGAEIARQISLENGSIMTPKFGGT
VGVSGLDGEGAFGSLSTGVTVETAENWSIDAGLLFNIEGDGETSAGARVGVSKKF
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaggttgagctcgtggaaagtcgctgcaggtcgtgcggtgtcctgtcttcat
acgatatccagaacgggcgccatcgctctttcgcttctccttgtgatagtgacacaggcg
cttgcccagtcagtcacggtttcggccgtccctgcgacgttcaatggccttggcgataac
atccgtttcgattacgtcattgatcccggctcctacaccatcaccagcatcaatcccaca
accacgtccatcaagggtgcagtagtatcctgtcccagcgtgggcagcggccttgaatgg
cccaacaagctgacatgtactgcggcttaccgcgtcgacgaactggatgtcatggccggg
cagttttcggatttcgccagtttctccggcacccgggtgggcggacattctttcagcttt
accagcaatacgctcgtcgtacgcgccgtagcaggcgggcctgtcgtcctgtcggtaacg
tcttcgcccaacccatccttgcccggccaagaggtggaagtcacggcaaccgtctcctcc
atgggctgcaatgccggccagtcgcctccggggagcgtcagcatttccgtcggttcccaa
tcggccaatctcggtctggcgccgaccgggccggtgagcccggcatcttccgccaccttc
cggacgacgagcctgtcatccggaacatatccagtaagcgcttcctacacaggaggcagt
ggctgcagcacatcttccgcaagcggctccaatcacacggtcgaaaccaaaccgactgtg
acgatcaatcaggcaacagcgcaagcggacccgacgtcccggtcgccgatcctgttcgac
gtcgctttcgacaaacccattgttggcttttccggcgccgatgtgcagctgtccggcacg
gccggcgccgccacggccacgatttctggttccggtgcaacctatcaggtggcggtgtcg
ggcatgaatcgggccggaaccgttgttgcaacgatcccagccggaagtgtcacgacaccg
gccggcctcgcaaacgaggcgtcgacgagttcggacaattcggtctcatacgacccggtc
aaaatcacccctgtcgcgattgccgatccagcctatcaacaggtctatggtccggtgggc
ctgaccgcgagcggcggtagtgcgcctcacagctttgcggtctcagcaggcacgctgccc
ggcgggctttctctttccagcaacggtgagctgaccggcattccaactcagaccggcaat
ttcagttttaccgtgacggcaaccgactctgacggtgcgacaggagaacactcctattcc
gtttccatcgcggcacccgtgatagatataagtcccacttccatccccaatgcgacgtat
gacatagcctacaaccagaccctaacagcctcgggcggttcatcaccacacagcttctca
gtgagcacgggctcgctgccgccgggcctttcattggctggctccggcgagctttccggc
acgccgatcttgtcgggcacctataacttcacagtcaccgcatccgatgtaaatggccag
acgggcagccgcgcttattccattagtgtcgcattcactctgcccgatgcgccggtgggt
ctgatggcaaccgccggtgacacccaggcggccgtatccttccagccgccgccacgcaat
ggtggtgtggcgatcacgggttatatcgtgacagcgacccccgcagatgtggcgccggta
gcaggggggaacagccccatcgttgtcacaggcctaaccaacggccaaagctacacgttc
acggttaccgccgaaaatgctgccggtcagagtgtcgcctccgttcaatcaaacagcgtc
actccgaaagcgtcacagacgctcacgttcaacaatccggggccgcagacgtttggaacg
acgcccacgctgacggctagcagcgattccggattgactccgatttttacttccgtcacg
accggcacctgcacaattacaagcagtggccttctgacctttgtttctacaggcacatgt
acgatcaatgcggatcagcccggcgacagcgattatcttcctgcgagccagatcacgcgc
tcgttcaccgtcaatccacaggcacctgtggccaacgcggtctcggtcagtgtcgcacat
gattcgtccgacaacgtcatcgctctcaatgtgacgggtggagacccggccagcgtcgcc
atcgccacggctccgtccaatggcaacgcgacagcaaccggaaccatgatcacctatacg
ccaagaccggcatatacgggtcaggacagtttcacctatacggcaacgaatgtcagcggt
gtgtctgcgcctgcaaccgtcacagttttggtcacggcgacgacactcgtcttctctccc
tccgcaggacggctgacggatgcattcgtcgatatgccctatagccagaccgtcacagta
tcaggcggcaatgcaccctatcaatatacgagcagcggcgcgctgcccgatggcctcaac
ctgaattccgccaccggagagatcacgggcaatccgacgacggaaggaaatgcgagcttc
aatatcaccgcacgcgacaccaacggcgttaccgcttctgctgcctacaccatagctgtc
ctggttgccgcgcctgtcgcaagcgacagcacagtaaccgtcgtcgcagatagtaccggc
aatcccgtacctctcggcatatcgggaggcaggctggacacaatcgctgttatcaccggc
ccatcacacggaactgtcagcgtgatcggcaccagtgttacctacacgccgaacagcggc
tattccggcaccgacagctttacctattcggcgagaaactcttcgggcaattcgtccgcc
acggtcacgatcacagttacaccgccagcgggcgccctcgccctttcacccgcaggcgga
gctttgacggaagcgatggcaggagaagcttacagtcagtccatcacggcttccggcggc
accaacccgctgctctacagccttgccggcggtacattgccaaaaggtatgatcctcaat
ctttcaaccggtgaactcacaggtccgctggagaccgaaaccgagggtgactatagcttt
accgttcaggtgcgggacgctcgaggggcaaccgctgcagcagcctatacgctgaaagtg
aagacccgcgaaatcaacgtcgccaaccgggagatcagcgtagcgccgggcgcaacaccg
ccgaatatcaatctcgccacaggcgccacgggcggtcccttcaccggcgccgatctcacc
tttgtcagtcctgccaacgccggtcgggcaagcatcgtgaacggcgaattcgctcaggcc
ggcggtacgcaggcgacgggattgtacctcaaattcatccccaatcccgcattctcgggt
caagcccgggtgggttttcgtctcgtcagtgcactgggtgcctccaacgaggggaccgtc
acctataatctcggttacgatgctgcacaggtggcagacgagataaatgatctcgtgcat
ggatttgtccgcgccagacagaacatcatcgcgtcaacgatcaaggtgccgggccttctt
gaacggcgacagatggtcaacgccaccagtgccgtcacttcacgtgcaatgccttccgga
gagggcatggttctgagtttcgccaccagccttgcgcagatcgaagctgcccgaaacaac
gccgatggcgtgacgagaacggaaatgccgcttttcaacatctggcttgacggctcgttc
ctcgtccacaaccgggatgaatcgggaagcaaatggggcagcttcgccatggtttcagca
ggtgtggactatttgctttccgacaaggcaatgcttggtttttccttccatttcgaccgc
atgacggatccgacgaacggtgacaacgagttgaccggtaacggctggctccttggcccc
tatgcctcgtttgaaatcgccagaagcgttttctgggacagcagcctgctgtatggcggc
tctgcgaacgacatcgatacacccttctgggacggatccttcgataccagccgttggctt
ttcgacacgtcgatctcgggacgctgggacatcaatgacgtcacgaccttcacgcccaga
tttcgaggtgtttatctatccgagactatcgaaaactatacagtcggcaatgacgttggt
gacctgatcgagctgcgcggttttaaggaagagcaactgcgtgtcagcctcggcgccgag
attgcgcgccagatttcccttgaaaacggttccatcatgacaccgaaattcggcggaaca
gttggtgtttcggggctggatggagaaggcgcctttggctccctcagcacgggagtaaca
gttgagactgcggaaaactggtccattgacgccggcctcctttttaacattgaaggcgat
ggggaaacctcggctggcgcaagagtgggtgtcagcaaaaagttttag
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