Agrobacterium tumefaciens Ach5: Ach5_44940
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Entry
Ach5_44940 CDS
T03816
Symbol
gabD
Name
(GenBank) succinate semialdehyde dehydrogenase
KO
K15786
aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00260
Glycine, serine and threonine metabolism
atf01100
Metabolic pathways
atf01120
Microbial metabolism in diverse environments
Module
atf_M00919
Ectoine degradation, ectoine => aspartate
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ach5_44940 (gabD)
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GFIT
Motif
Pfam:
Aldedh
PNP_UDP_1
MEF2_binding
Motif
Other DBs
NCBI-ProteinID:
AKC10267
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Position
linear:complement(1994621..1996099)
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AA seq
492 aa
AA seq
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MRSIASTALKNLRRPDLIERRAFLHGSWAARDETLGVIDPATGEDLIGVAACSLEDADDA
VTTAKNAFLEWRDKLPTERGQILREWGKLMRNNAHDLAVIMTAEQGKPLSESLGEIAYAA
NFLDWFAGEGERAYGETIPSHLPDSRVSVQMQPLGVTVAITPWNFPSAMITRKAGAALAA
GCTMIVKPAPETPLSALALAKLAEEAEMPAGVFQVITGHAAPLAHRLLQHTDVRAFSFTG
STEIGRILLAQSAATIKKASLELGGHAPFILFDDADVSKAVKGCIGAKFATSGQDCLAAN
RIYVQRGIYDRFVSQFGKASAELKVGHGFEAGIDIGPMTRPSVAEKCRKQIAQALSAGAQ
LICGGQDSPLGGNFVTPTVLADVTDDMLIAREETFGPVAAILPFDDEREVVRRANSTEMG
LAAYLYTNDLGRAMRLTHQLEYGMVAVNTPKFTGAPVPFGGWKQSGLGREGSRHGLMEYL
EPKYVCFGNLAA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtattgcaagcactgcattaaaaaacctgcggcggcccgatttgatcgagcga
cgcgcttttctccatggcagttgggctgctcgcgatgaaacgctcggtgtcattgatccg
gcgaccggagaagatctcatcggtgtggcggcatgttcgcttgaggatgcggatgatgcc
gtcactaccgcgaaaaatgcctttctagaatggcgcgacaagcttccaaccgaacgcggg
cagatcttgcgtgaatggggcaagttgatgcgcaacaacgcgcatgatctcgccgtcata
atgacggccgaacagggcaaaccactctcggaatcgcttggtgaaattgcttacgctgcc
aatttccttgattggtttgccggcgaaggcgagcgcgcctacggcgagacgataccgagc
catttgcccgacagccgtgtctcggtccagatgcagccgctaggcgtcaccgtggccatc
acgccgtggaactttccctctgctatgatcacccgcaaagcgggcgcagcgcttgccgct
ggctgcacaatgatcgtcaaaccggcgcctgaaacacccctctcggcgctcgctttggca
aagctcgctgaggaagctgaaatgcccgccggcgtattccaggtcatcaccggtcacgct
gcaccacttgcgcaccgcctgttgcaacacaccgatgtgcgcgcattttcctttaccggc
tccactgaaatcggtcgtattttgctggcgcaatcagcggcgaccatcaagaaagcctcg
ctggaacttggaggtcacgcgcccttcatcctgttcgacgacgccgatgtctccaaagcc
gtaaaaggttgcatcggggcgaaattcgcaacatcggggcaggactgcctcgctgccaac
cggatctacgtccagcgaggtatttatgaccgcttcgtcagtcagttcggcaaggcaagc
gccgaactgaaggtcggccacggttttgaggccggcatcgatatagggccgatgacacgc
ccctccgtcgctgaaaagtgccgcaagcaaatcgcgcaggcgctctctgcgggtgcacaa
ctcatctgcggcgggcaggatagtccgctcggcggcaatttcgtcaccccaaccgtgctg
gccgatgtcacagacgacatgctgatcgcgcgggaggagaccttcggtccggttgccgcg
atcttgccattcgatgacgagcgggaggtcgtgcggcgcgccaactcgacggagatgggg
cttgcggcctatctctacaccaacgatctcggccgggcgatgcgtctgacgcatcaactg
gaatatggcatggtagccgttaacacgccgaaatttaccggcgcgcccgttcccttcggc
ggctggaaacaatccggccttggtcgtgagggctcgcgtcatggtctcatggaatatctc
gaacccaaatatgtctgcttcggcaacttagctgcgtga
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