Agrobacterium tumefaciens Ach5: Ach5_49990
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Entry
Ach5_49990 CDS
T03816
Name
(GenBank) hypothetical protein
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atf03000
]
Ach5_49990
Transcription factors [BR:
atf03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Ach5_49990
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
HTH_24
HTH_1
MarR
Motif
Other DBs
NCBI-ProteinID:
AKC10762
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Position
pAt:complement(412278..413030)
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AA seq
250 aa
AA seq
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MDDEKKTETTKRDGGSQDRATVRSVERAFDLLGCFSAEQKTITLTEAARAVDLPLSTVSR
LLGTLEASRFIRRLADGRYMPGGRLLRIGVVALHGVELYDVAEEYLERLASVTGESANLA
IPTNDGQVLYLRQVASRHSVRHDNWIGRSVPLDGTAIGDAIAGRVNADGFSLRTTTLEPD
VTAVAVPVYGADAQIIAALSVTSPSYRVDETFIARTGDRLVAEAQDLSSHLGAPAWAGKN
PSETRQRGLK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgagaaaaaaacagaaacgaccaagcgggatggcgggagtcaggaccgtgcg
acggtcaggtccgtcgagcgtgcattcgatcttctcggatgcttcagcgccgaacagaag
accattacgcttacggaagccgcgcgtgccgtcgatcttccgctaagcaccgtatcgcgc
ttgctcggaacactcgaagcctcccggtttatacgtcggcttgccgatggccgctacatg
ccaggcggacggttgctgcggatcggtgtcgtcgcactgcatggggtggagctttacgat
gtcgcagaggaatatctggagcgtctggccagtgtgactggggaatcggccaatctggca
attcccaccaatgacgggcaggttctgtatcttcgccaggtggcaagccgccactcagtg
cgtcacgacaactggatcggccgatctgtcccgcttgatggaacggcgataggcgatgcg
attgccggcagggtgaacgcggacggtttttccctccggaccacgacgctcgaaccggac
gtaaccgctgtggctgtacccgtttatggcgcggacgcccagatcattgccgccctaagc
gtcaccagccccagctaccgcgtcgatgagaccttcattgcgcgcacaggcgatcggctg
gtcgcggaagcacaggacctgtcgtcccatctcggggcacccgcatgggccgggaaaaac
ccgtctgaaacccgccaaagaggtttgaaatga
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