Acinetobacter towneri: J4G44_04365
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Entry
J4G44_04365 CDS
T07268
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
atg
Acinetobacter towneri
Pathway
atg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4G44_04365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atg03019
]
J4G44_04365
03009 Ribosome biogenesis [BR:
atg03009
]
J4G44_04365
Enzymes [BR:
atg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
J4G44_04365
Messenger RNA biogenesis [BR:
atg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J4G44_04365
Ribosome biogenesis [BR:
atg03009
]
Prokaryotic type
rRNA processing factors
J4G44_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QTD59872
LinkDB
All DBs
Position
complement(926591..930019)
Genome browser
AA seq
1142 aa
AA seq
DB search
MKRMLINATHAEEIRVALVTGQRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYYKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEMLASLNVPRGMSVIVRTAGIGRSQEELQL
DLQHLLDLWAQIQNTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGQDVEDTALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSNVRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRSSEKELGYESSEWHLEEADQAHSHAAAPAAEKTSARKPQ
AAQQNKASAQQQLAPAAATTAASPCAWLENLFVQKQASTIDQARSANNAAAAIEQMVNSG
AVSRGQFGQIATASTAPAASSQNVYLAPSTVAQKTERDSADKSAEREDKPAPRHNNKKPR
HSNNNNKHKEQREPQTQHDNQQHQVHEEVVQISRQEQRQEARENKRNSRRQHSNDQAPQQ
QEAQNNNEQQNAVPRRDRRNQPRPERPNRHRDPSVLNEQAPTAVASNQPKVDLIDAPRQE
FNTTALVVNVDQAQTEIVALNAAPVAAEPVTAVEATVLETVTEPTQAVAVVEAAAVVAEE
TAAPAEAQAQPTAPAKRASNDPRQRRRQQREGQAQQVTAPKLTPSQVPTLAQYSIGSLIR
HVYGEDCSVLIEQFGLIPTFNRALQKFTDEYAASLVSTAPVAEKKPVTRDVEVAKAAPEA
EPAPVLDLTPPKPVSDKRVANDPRERRRLAKQAAEQALEQAKQAQAVEKAEAESTPAAEP
TTEVVAATEGSVEASSTVETSATVSTEVEATTEVNPEAVATTEATQPELNAQDDLAQAVT
ETAAAQEETAVEVVAPVQAELAVDDPVETAESEQDKAEKEKTARPRRPRGRPPKKVTPPT
ES
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacacatgccgaagaaattcgcgttgcacttgtcact
ggtcagcgtctttacgatttcgatttagaaaatcgtacccgtgaacaaaaaaaatcgaat
atctacaaaggtcatgtgacccgtgtagaaccttctttagaagccgtatttgttgaatac
ggtgcaggtcgccaaggcttcctgtcgatgcgtgaaatcgcaaactcttattacaaagcc
gaccctcgccaaacttctaatattcgtgaactgatcactgaaggcactgagcttttggta
caggtagaaaaagaagaacgtggcaacaaaggtgctgcgctctctaccttcatttctttg
gctggtcgttatttagtgcttatgccaaataacccgaaaggtggcggtatcagtcgtcaa
atttcaggttctgtgcgtgaagaactcaaagaaatgttggcatctttaaacgtgccacgc
ggcatgagcgtgattgtacgtactgcgggcattggtcgttcacaagaagaattacagctt
gatttacaacacttgcttgacctttgggcgcaaattcaaaacaccgcaagctctggccca
tcgccaatgttggtacaccaagaagcaggtgtggtgacacgtgcgattcgtgactactta
cgtgatgatgttgccgaaattttaattgactcagaacaagcttataacgaagcctataac
ttcgtaaaagccgtgatgccacgtcagttagacaagctaaaaacctatactttaaatgag
ccgctattcgcgcattttggtatcgaaagccaaattcaaacagcttatgagcgtgaagtt
aaattgccttcaggcggctcaattgtcattgaccaaactgaagcattagtttcaattgac
atcaactcggctaagtctacccgtggtcaagatgttgaagatactgcgcttaataccaac
cttgaagctgccgaagaaattgcgcgtcaattgcgtttacgcgacatcggtggtttggtg
gtcatcgactttatcgacatgaccaaagaccgcaaccaacgtatggttgaagccaaactt
cgtgaagcaacacaaagtgaccgcgcacgtattcaatttggtcaattatcacgttttggt
ttaatggaaatgagccgtcagcgcttacgtccatcacttgaagaagcgactggttacgtt
tgcccacgctgtcacggtacaggcatggtacgtgacctacgctctctttcactttcaatt
atgcgtaaagtggaagaaattgccctgcgtgaacgtcatggtgaagttcaagtcgaagta
cctgttgaaattgcagcattcttactgaatgaaaaacgtcacagtctggtttaccttgag
caaacctcaaatgtgcgtgtgactgtattacctcacccacacttagaaaccccgcattac
gaaatttcgtataatcctgaaggctttgcaccaaccagctatgaacgtactgaagcaact
cgttcaagcgaaaaagagttgggttatgaatcttctgaatggcatttagaagaagccgat
caagcgcacagccacgctgctgcacctgcggcagaaaaaacctctgcaagaaaaccacaa
gcagcacagcaaaataaagcatctgcacaacagcagcttgcacctgcggcagccacaaca
gctgcaagcccatgtgcatggttagaaaacctgtttgttcaaaagcaagccagcactatt
gatcaagcacgtagtgccaacaatgctgcagcagccattgagcaaatggtaaatagcggt
gctgtgagccgtggtcagtttggtcaaattgcaactgcgtctactgcccctgctgcaagc
agtcaaaatgtgtaccttgcaccatcaacagtggcacaaaaaactgaacgtgactctgca
gataaatctgctgaacgtgaagacaaacctgctccgcgtcacaacaacaaaaagccgcgt
cacagcaacaacaataacaagcacaaagagcaacgtgagccgcaaactcagcacgataat
caacaacatcaagtgcatgaagaagtggttcaaatatcgcgtcaggagcaacgtcaggaa
gcgcgtgaaaacaaacgcaattctcgtcgtcagcacagcaatgaccaagcaccgcagcag
caagaagctcaaaataacaatgagcagcaaaatgccgtgccacgtcgtgaccgtcgtaac
cagcctcgtccagaacgcccaaatcgtcaccgcgacccaagcgtattgaatgagcaagca
cctaccgcagtggcttctaatcagccaaaagtggacttaattgatgcaccgcgtcaagag
ttcaacacgacggctttggtagtgaatgtcgatcaagctcaaactgaaattgtggcattg
aatgctgcgccagtagcggctgaaccagtgacagcagtagaagcaactgtgcttgaaacg
gttactgaaccaactcaagctgttgcagtggtagaagctgcagccgttgttgcagaagaa
acagctgcacctgcggaagctcaagcacaaccgactgcgcctgcaaaacgtgccagcaat
gacccgcgtcagcgtcgtcgtcagcaacgtgaaggtcaagcgcagcaagtaactgcacca
aagttaacaccttcacaggtgccaactttagcgcaatacagcattggtagcctgattcgc
cacgtctatggcgaagattgttcagttctgattgaacagtttggtttaattccaacgttc
aatcgtgctttgcagaagttcactgacgagtatgctgcaagccttgttagcactgcgcct
gtggcagagaaaaaacctgtcactcgtgatgtggaagttgccaaagctgctcctgaagct
gagcctgcacctgtgttagacctaacaccaccaaaaccagtgtcagataagcgtgttgcc
aacgatccgcgtgagcgtcgtcgtttagccaaacaagctgctgagcaagcattggaacaa
gccaagcaagcacaggcagtagaaaaagctgaagcggaaagcacacctgcagcagagcca
acgactgaagttgtggcagctacagaaggatctgtagaagcaagttctacggtagaaacg
tctgcaacagtaagcactgaagtcgaagcaactacagaagtaaaccctgaagcagtggct
acaactgaagctactcagcctgagttgaacgcgcaagacgaccttgcacaagctgtcact
gaaactgcagcagcgcaagaagaaactgccgttgaagtggtcgcacctgtacaagcggaa
ttggctgtagacgacccagtcgaaactgctgaatctgaacaggacaaagcagagaaagag
aaaactgcgcgtccgcgtcgtccacgtggccgtccacctaaaaaagtaactccgccaact
gagtcgtaa
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