Acinetobacter towneri: J4G44_05710
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Entry
J4G44_05710 CDS
T07268
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
atg
Acinetobacter towneri
Pathway
atg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
atg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4G44_05710 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atg03021
]
J4G44_05710 (rpoD)
Transcription machinery [BR:
atg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4G44_05710 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QTD60113
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All DBs
Position
complement(1200115..1202001)
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AA seq
628 aa
AA seq
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MSDMNSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APESDDAMFEDNAEAADEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVQVVLQEYKDYEAGERRLADILSGYLDPETDEEIPE
VLEDEADLDKEEDTSNKPTKDVKLDDDDEEEEAEAEEESEADSGPDPEIARMRFGELEQA
YLAKIAAIEKHGRESAEAQEALEALATVFMMFKFTPRLFDIISEMIRGTHEQIRTAEREV
MRYAVRRGRMDRTQFRTSFPGQESNFAWLDEHIAKAPADQKGYLEKVRPDILAFQQKIAD
IEKELGLDVKGIKEISKRMAVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQ
EGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRV
SRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDS
NITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRER
IRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgaattcccctacttcgcaagtagcggctctgattagccgaggcaaagag
caaggttacctaacttacgctgaggttaacgatcatctcccggactcaatcacagaaagc
gagcagattgaagacattattcaaatgcttcaagacgtcggtattcctgtgcatgaacgt
gcgcctgaatctgatgatgcaatgttcgaggataatgcggaagctgccgacgaagttgct
gaagaagaagctgcagcggtacttgcctctgtagaaaatgagcctggtcgcaccacagac
cctgtgcgtatgtatatgcgtgaaatgggtacggttgagctgttaacgcgtgaaggtgaa
attagcattgcgaaacgtattgaagaagggattcgcgatgtacttcactcgattgcctac
tggccaaacgcagtgcaagtggtactgcaagaatataaagattatgaagcaggcgaacgt
cgccttgccgatattttatcaggttatttagaccctgaaaccgatgaagaaattccagaa
gttttagaagacgaagccgatttagacaaagaagaagacaccagcaacaaaccaaccaaa
gacgtcaaacttgatgatgacgatgaggaagaagaagctgaagccgaagaagaatctgaa
gcagattcaggtccagacccagaaattgcaagaatgcgttttggtgaattggaacaggct
tatcttgcaaaaattgctgccattgaaaaacatggtcgtgaaagtgccgaagctcaagag
gctttagaagctttagcgactgtattcatgatgtttaaatttacgccacgtttattcgat
attatttcggaaatgattcgtggtacacatgaacaaattcgtactgctgaacgtgaagtg
atgcgttatgcggtgcgtcgtggtcgtatggatcgtactcaattccgtacctcattccca
ggtcaggaatctaactttgcttggttagacgagcacattgccaaagcacctgccgaccaa
aaaggctatttggaaaaagtacgtccagatattttggcgttccaacaaaaaattgccgac
attgaaaaagagttaggcttagatgttaaaggcatcaaagaaatttctaagcgtatggca
gtaggcgaagccaaagcccgtcgtgcgaaaaaagaaatggttgaagccaacttgcgtctg
gttatttcgattgcaaaaaaatacaccaaccgtggtttacaattcctagacttgattcag
gaaggtaacatcggcttgatgaaagcggtagacaagttcgaataccgtcgtggttataag
ttctcgacttatgcaacatggtggattcgtcaggcgattacccgttctattgccgaccaa
gcgcgtaccattcgtattccagtacacatgatcgaaaccattaacaagatcaaccgtgta
tcgcgtcaattgcttcaggaaatgggtcgtgaaccgactccagaagaattaggcgaacgc
ttggaaatggatgaagttaaagttcgtaaagttctgaaaattgccaaagagccgatttct
atggaaacgccaattggtgatgatgaagattcacatttgggtgacttcattgaggacagc
aacatcacctcacctgttgatgcggcaacctctgaaggcttaaaagaagcgacccgtgaa
gtgcttgaaaacttgactgaacgtgaagccaaagttctgaaaatgcgttttggtattgat
atgccaaccgatcatactttggaagaagttgggaagcagtttgatgtgacccgtgaacgt
atccgtcagattgaagccaaagccttacgtaaacttcgtcacccttctcgttctgaacac
ttacgctcgttcttggaaaatgactaa
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