KEGG   Acinetobacter towneri: J4G44_07920
Entry
J4G44_07920       CDS       T07268                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
atg  Acinetobacter towneri
Pathway
atg02024  Quorum sensing
atg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J4G44_07920 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    J4G44_07920 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atg03019]
    J4G44_07920 (hfq)
   03036 Chromosome and associated proteins [BR:atg03036]
    J4G44_07920 (hfq)
Messenger RNA biogenesis [BR:atg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     J4G44_07920 (hfq)
Chromosome and associated proteins [BR:atg03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    J4G44_07920 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QTD58266
LinkDB
Position
1646496..1647017
AA seq 173 aa
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAPAGGQGAGFGGQGAGFGGQGGGFGGQGGFGAQGGGFGGQGGFGGQGG
GFGSQGGGFGGQGAGFGGQGGGFGGQGGFGGQSASGFDNDSKFEESQEDDNNR
NT seq 522 nt   +upstreamnt  +downstreamnt
atgtctaaaggtcaaactttacaagatccgttcttaaattctctccgtaaagaacgtatt
cctgtttctatcttccttgtgaacggtatcaagctacaaggtcatattgaatcttttgac
caatatgttgttttattgaaaaacacggtaagccaaatggtttacaaacatgcaatttct
acagttgttcctgcacgtaatccacgtccagcgggtgcaccagcaggcggtcaaggcgca
ggctttggtggtcaaggcgcaggcttcggtggtcaaggtggtggcttcggtggtcaaggc
ggcttcggtgctcaaggtggtggctttggcggtcaaggtggcttcggtggtcaaggtggt
ggcttcggtagtcaaggtggcggcttcggcggtcaaggcgcaggttttggtggtcaaggt
ggcggctttggcggtcaaggtggcttcggtggtcagtctgcaagcggttttgacaacgat
tctaaatttgaagaatctcaagaagacgacaacaatcgttaa

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