Arabidopsis thaliana (thale cress): AT1G01060
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Entry
AT1G01060 CDS
T00041
Symbol
LHY
Name
(RefSeq) Homeodomain-like superfamily protein
KO
K12133
MYB-related transcription factor LHY
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
AT1G01060 (LHY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT1G01060 (LHY)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
AT1G01060 (LHY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
839341
NCBI-ProteinID:
NP_001320627
TAIR:
AT1G01060
UniProt:
Q6R0H1
A0A178W761
LinkDB
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Position
1:complement(33365..37871)
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AA seq
645 aa
AA seq
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MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRKPNTPYPRKPGNNGTSSSQVSS
AKDAKLVSSASSSQLNQAFLDLEKMPFSEKTSTGKENQDENCSGVSTVNKYPLPTKQVSG
DIETSKTSTVDNAVQDVPKKNKDKDGNDGTTVHSMQNYPWHFHADIVNGNIAKCPQNHPS
GMVSQDFMFHPMREETHGHANLQATTASATTTASHQAFPACHSQDDYRSFLQISSTFSNL
IMSTLLQNPAAHAAATFAASVWPYASVGNSGDSSTPMSSSPPSITAIAAATVAAATAWWA
SHGLLPVCAPAPITCVPFSTVAVPTPAMTEMDTVENTQPFEKQNTALQDQNLASKSPASS
SDDSDETGVTKLNADSKTNDDKIEEVVVTAAVHDSNTAQKKNLVDRSSCGSNTPSGSDAE
TDALDKMEKDKEDVKETDENQPDVIELNNRKIKMRDNNSNNNATTDSWKEVSEEGRIAFQ
ALFARERLPQSFSPPQVAENVNRKQSDTSMPLAPNFKSQDSCAADQEGVVMIGVGTCKSL
KTRQTGFKPYKRCSMEVKESQVGNINNQSDEKVCKRLRLEGEAST
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggatactaatacatctggagaagaattattagctaaggcaagaaagccatatacaata
acaaagcagcgagagcgatggactgaggatgagcatgagaggtttctagaagccttgagg
ctttatggaagagcttggcaacgaattgaagaacatattgggacaaagactgctgttcag
atcagaagtcatgcacaaaagttcttcacaaagttggagaaagaggctgaagttaaaggc
atccctgtttgccaagctttggacatagaaattccgcctcctcgtcctaaacgaaaaccc
aatactccttatcctcgaaagcctgggaacaacggtacatcttcctctcaagtatcatca
gcaaaagatgcaaaacttgtttcatcggcctcttcttcacagttgaatcaggcgttcttg
gatttggaaaaaatgccgttctctgagaaaacatcaactggaaaagaaaatcaagatgag
aattgctcgggtgtttctactgtgaacaagtatcccttaccaacgaaacaggtaagtggc
gacattgaaacaagtaagacctcaactgtggacaacgcggttcaagatgttcccaagaag
aacaaagacaaagatggtaacgatggtactactgtgcacagcatgcaaaactacccttgg
catttccacgcagatattgtgaacgggaatatagcaaaatgccctcaaaatcatccctca
ggtatggtatctcaagacttcatgtttcatcctatgagagaagaaactcacgggcacgca
aatcttcaagctacaacagcatctgctactactacagcttctcatcaagcgtttccagct
tgtcattcacaggatgattaccgttcgtttctccagatatcatctactttctccaatctt
attatgtcaactctcctacagaatcctgcagctcatgctgcagctacattcgctgcttcg
gtctggccttatgcgagtgtcgggaattctggtgattcatcaaccccaatgagctcttct
cctccaagtataactgccattgccgctgctacagtagctgctgcaactgcttggtgggct
tctcatggacttcttcctgtatgcgctccagctccaataacatgtgttccattctcaact
gttgcagttccaactccagcaatgactgaaatggataccgttgaaaatactcaaccgttt
gagaaacaaaacacagctctgcaagatcaaaacttggcttcgaaatctccagcttcatca
tctgatgattcagatgagactggagtaaccaagctaaatgccgactcaaaaaccaatgat
gataaaattgaggaggttgttgttactgccgctgtgcatgactcaaacactgcccagaag
aaaaatcttgtggaccgctcatcctgtggctcaaatacaccttcagggagtgacgcagaa
actgatgcattagataaaatggagaaagataaagaggatgtgaaggagacagatgagaat
cagccagatgttattgagttaaataaccgtaagattaaaatgagagacaacaacagcaac
aacaatgcaactactgattcgtggaaggaagtctccgaagagggtcgtatagcgtttcag
gctctctttgcaagagaaagattgcctcaaagcttttcgcctcctcaagtggcagagaat
gtgaatagaaaacaaagtgacacgtcaatgccattggctcctaatttcaaaagccaggat
tcttgtgctgcagaccaagaaggagtagtaatgatcggtgttggaacatgcaagagtctt
aaaacgagacagacaggatttaagccatacaagagatgttcaatggaagtgaaagagagc
caagttgggaacataaacaatcaaagtgatgaaaaagtctgcaaaaggcttcgattggaa
ggagaagcttctacatga
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