Arabidopsis thaliana (thale cress): AT1G01320
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Entry
AT1G01320 CDS
T00041
Name
(RefSeq) Tetratricopeptide repeat (TPR)-like superfamily protein
KO
K03255
protein TIF31
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ath03012
]
AT1G01320
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
AT1G01320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
CLU
TPR_MalT
TPR_8
Motif
Other DBs
NCBI-GeneID:
839293
NCBI-ProteinID:
NP_171639
TAIR:
AT1G01320
UniProt:
F4HS99
LinkDB
All DBs
Position
1:complement(121067..130577)
Genome browser
AA seq
1797 aa
AA seq
DB search
MAPKNNRGKTKGDKKKKEEKVLPVIVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFD
TCHVTNYSLSHEIRGSRLKDTVDVSALKPCVLTLTEEDYNEGTAVAHVRRLLDIVACTTC
FGPSPEKSDSVKSAQVKGGGKNSKQSDTSPPPSPASKDTVVDEAGETSHSFPKLGSFYEF
FSLAHLTPPLQYIRLATKRETEDIAKEDHLLSIDVKLCNGKLVHIEGCRKGFYSIGKQRI
ICHNLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPP
LPVEDERWGGDGGGQGRDGSYDLVPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVD
VATFRAIKAVQKVMAEPVLAEEDSEVLYSETVRDLTVTVTRDTSNASSKVDTKIDGIQAT
GLDKKKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYIAVVKLEKESEELSPPSQIV
DLLEQPEGGANALNINSLRFLLHKSSPEQNKKTPQQHDDELTSSREFVSKMLEESIAKLE
GEEIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTGEKSKNELKVEGLGKPLKSLNSSKK
KTDVSSPKTPQTALSSQVDAVSSEADTAASLQSDAEKNAQENVLILKNLLSDAAFTRLKE
SDTGLHHKSLQELVDLAQNYYTEVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSL
GYVVKLSDKLSHVQSLCVHEMIVRALKHILQAVISAVATDTDKIAIKVAAALNMMLGIPE
NVAATPHNPWNVHPLIFRWLEKFLKKRYDYDLNAFSYKDLRKFAILRGLCHKVGIELIPR
DFDMDSPAPFRKTDVVSLVPVHKTFYFKSMQQAACSSADGRQLLESSKTALDKGKLEDAV
TYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDH
PDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLG
NVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYHLSVQHEQTTLRILRA
KLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTPKPDASIASKGHLSVSDLLDYINPSH
NAKGKESVAAKRKNYILKLKEKSKQSNVSEHLVEIPREKQKEMSEEDTEETGSEEGKSSE
ENHETILAPVEEPPSPPVIEDATMDNSNPITSSDVSTEPQHPDGSEDGWQPVQRPRSAGS
YGRRMKQRRASIGKVYTYQKKNVEADIDNPLFQNATQQNDKYYILKKRTASYSSYADHHS
PGLTTQGTKFGRKIVKTLAYRVKSTQPSSGNAKTAGETSEEDGLKTDASSVEPPTLSSTV
QSEAYHTKNSVVSLGKSPSYKEVALAPPGSIAKYQVWVPQAEVSDKQEDDEMEKKTEQGT
SMELTRDEQMITGLEEEVKKEISADPESNITQGEEEIKVELQPSEGVLGGSHINENDESG
GGIQVEEQVEVELINDGVTDMIHSTREQQVIDQLAADSEDLKAKLSISTTDSGDASRGLL
PNKKLSASAAPFNPSSPPSIIRPTPIGMNIGPSWPVNMTLHHGPPPPYPSPPTTPNLMQP
MSFVYPPPYSQSVPTSTYPVTSGPFHPNQFPWQLNVSDFVPRTVWPGCHPVEFPPPHMIT
EPIAATVLEPTVILPTDIDTSGVEETKEGTQDVAVADEVMDSVNHVNNAVARSETENGNR
KSEEGEKTFSILLRGRRNRKQTLRMPISLLNRPYDSQPFKLGYSRVIRDSEAPKSVA
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagaacaaccgtggaaagacaaaaggagataagaagaagaaggaagagaaa
gttctcccggttatcgtggatgtcattgtaaaccttccggatgaaacggaggctattttg
aagggcatatcaacggacaggatcatagatgttcggcggctgttatcggttaacttcgac
acctgccacgtcaccaattattcgctctcccatgagataagaggatcgcggttaaaagac
acagtggatgtgtcggcccttaaaccctgtgttctcacgttaacggaagaggattacaat
gaaggaacagcagtggcgcacgttagacggctgcttgacatcgtcgcctgtaccacttgc
ttcggtccgtcgccggagaaatcagactccgtgaaaagtgcgcaggttaagggaggtgga
aagaattctaaacagtcggatacgtcgcctccgccgtctcctgcgtcgaaggatactgtg
gttgatgaagccggagagactagccactctttccctaagcttggaagtttctacgagttt
ttctctctcgctcatctcactcctcctcttcaatatattcggctcgcgactaagcgggaa
actgaagatatagccaaggaagatcatcttctctccattgatgtgaagctttgtaatggg
aagctcgttcatattgaaggttgcagaaaaggattttacagcattgggaaacaaagaata
atatgtcacaatcttgttgatttgcttagacaaatcagtagagccttcgataatgcttac
agtgatcttctgaaagcattttcggagcgcaataagtttggaaatcttccatatgggttt
agagctaacacatggctcatcccgcctactgcggcgcagtcaccagcagcgtttccgcct
ctccctgttgaggatgagagatggggaggggatggtggtggtcaagggagagatggcagc
tacgacttggttccatggtccaacgaattcgcctttatcgcatctatgccttgcaaaaca
gcagaggagagacaagtcagagacagaaaagtgtttcttcttcacaacctctttgttgat
gtcgcgactttcagagccatcaaggctgttcagaaagtaatggctgagccagtactggct
gaagaagactccgaagttctctattccgagacagttagagacttgactgttacggttaca
agggatacttcaaatgcaagtagtaaagtggatacaaaaatcgatggaattcaagccact
ggtttggataaaaagaagctgatggaacggaaccttctcaagggacttacagctgatgaa
aatactgctgctcatgacgttgctactttaggaactataagtcttaagtactgtggttac
attgctgttgtgaaattagagaaggagagtgaggagttaagcccaccttctcaaattgtt
gacctccttgaacagcctgaaggtggtgctaatgctctaaatatcaatagtttgagattc
cttctccataaatcctctcctgagcagaacaagaaaacacctcagcaacacgatgatgaa
cttacatcttcacgggaatttgtaagtaaaatgctggaagaaagcattgctaagcttgag
ggagaggagatagacagggatagtatcatgagatgggagcttggagcttgttggatacag
catttacaagaccaaaagaatacagaaaaggacaaaaaacaaaccggtgaaaagtctaag
aatgaattgaaggttgaagggcttgggaaaccgcttaagtccctcaatagcagcaaaaag
aaaacagatgtgagcagccctaagacgccgcagactgcattatcgtctcaagtcgatgcg
gtttcttcagaggctgatactgctgcatctttgcaatccgatgctgagaagaatgctcaa
gaaaatgtgctcatcttgaagaatttgttgtctgatgcagccttcactcgcctaaaagag
tcagatactggacttcatcacaagtctttgcaagaacttgtcgacttggcacagaattat
tatactgaagttgctattccgaaactggttgcagattttggttcattggagctctcccca
gtcgatggccggactctaactgattttatgcacacaagaggtcttcggatgcgttcttta
ggatatgttgtgaagctttcagataaattgtcacatgtacaatcgctgtgtgttcatgag
atgatagtaagagcccttaagcatatcctccaggcggtgatttctgctgttgctactgac
actgacaaaatagctataaaagtagctgctgctttgaacatgatgcttgggattcctgaa
aatgttgcagcaacaccacataacccttggaatgtacatcctctgatcttccgatggttg
gagaaattcttgaagaaacggtatgattatgatcttaatgccttcagttacaaggatcta
cggaagtttgccattctccgaggcttatgccataaggttggtattgagttgattccaagg
gactttgacatggattctcctgcacctttccggaaaacagatgtggttagtcttgtccca
gtgcataagactttctattttaaatctatgcagcaagcagcatgttcatctgctgatgga
aggcaacttctggagtcatctaaaacagctttagacaaaggaaagcttgaagatgcagtt
acatatggaacgaaggctcttgctaaactcgtagcagtttgcggtccctatcacagaatg
acagccggagcttacagtttacttgctgtggttctatatcacactggtgactttaaccag
gctacaatatatcagcaaaaggctttagacatcaatgagagggaacttggacttgatcat
ccagatacaatgaagagttatggtgatcttgctgtcttctattataggcttcagcataca
gagctggctctcaagtatgttaagcgtgcgttgtatctcttacatctcacatgcggtcca
tctcatccaaatactgctgctacatacatcaatgtagccatgatggaggaaggtctagga
aatgtgcatgttgccttgaggtatcttcacaaagctctcaagtgtaatcaaaggttgctt
ggtccggaccatatccagactgctgcaagctaccatgccatagcaattgcgctctccttg
atggaggcataccatttaagtgttcagcatgagcaaacaaccttaagaatccttcgagca
aagctggggccagatgatttacgtactcaggatgctgctgcttggctagaatactttgag
tccaaggcttttgaacaacaagaagctgcgcgaaatggtactcctaagccagacgcgtct
atagccagcaaaggccacctaagtgtttccgatctactcgactatatcaacccaagtcat
aacgcaaaaggcaaagagagcgtggcagcaaagaggaagaactatattctgaagctaaag
gaaaaatccaagcaaagcaatgtttctgaacacttggtggaaattccgagagaaaagcaa
aaggagatgtctgaagaggatacggaagaaactggatcagaagaaggtaaatcaagcgaa
gagaatcacgagacaattcttgcaccagttgaagaaccaccttctcctccagtaattgag
gacgctactatggataacagtaatccaattacatctagcgacgtttcaaccgagccacaa
caccctgatggtagtgaagatggatggcaaccggtgcaaagaccgagatctgctggatca
tatggtcgcaggatgaagcaacggcgagcatccatcgggaaggtatatacatatcagaag
aagaatgttgaagctgatatcgataaccctcttttccagaatgctactcagcagaacgac
aaatactacattctcaagaagcgaacagcatcatattcaagctatgcagatcatcattct
cctggtttaacaactcaaggcaccaaatttggcaggaagatagttaaaaccttggcgtat
cgggttaaatcgacgcagccgtcttctggtaacgctaagactgctggtgaaacttcagaa
gaagatgggttgaagacagatgcttcttctgttgagccacctactctgtctagtactgtg
caaagtgaagcctaccacacgaaaaactctgttgtaagtcttggaaaatctccatcctac
aaggaagtagcattggcaccacctggttcaattgctaagtatcaagtctgggttccacaa
gcggaagtttcagataagcaagaggatgatgagatggagaaaaaaactgaacagggtaca
tcaatggagcttacaagggatgagcaaatgataacagggttagaggaagaggtaaaaaag
gaaatttctgcagacccagaatctaacataacccaaggcgaagaagagatcaaagtagag
ttacaaccatctgaaggagtactcggaggaagtcatataaatgaaaacgacgaatctggg
ggtggaattcaggttgaagaacaagtcgaagttgaattgataaacgatggtgtaacagat
atgattcattcgaccagagagcaacaagtgatagatcaattagctgctgattccgaagat
ctgaaggcaaaactgtcaatttctactacggactcaggcgatgcctcacgaggattgttg
cctaacaagaagctatctgcgtcagctgctccattcaacccatcatcacctccaagtatt
atacgtcctactccaataggcatgaacattggaccgtcgtggccagtgaacatgactctt
catcacggacctcctcctccttacccttcacctccgacaactccaaacttgatgcagcca
atgtcctttgtttaccctcctccttacagtcaatcagtccccacaagtacttaccctgta
acaagcggtccttttcatcccaatcagttcccatggcagctcaatgtgtcggattttgta
ccaagaacggtttggcctggatgccatcccgttgagtttcccccaccgcacatgatcacc
gagccaatagctgcaactgtgttagagccaactgtgattctgccaacggatattgacact
tcaggtgtagaagaaaccaaagaaggcacgcaagatgtggcagtcgccgatgaagttatg
gattctgttaaccatgtgaacaacgcagttgcacgcagtgaaacggagaatggaaaccgg
aaatctgaggaaggtgagaaaactttcagcattttgttaagagggaggagaaacaggaaa
caaacactgagaatgccaatcagtttgcttaaccggccttatgattctcaaccgttcaag
cttggctatagcagagttatcagagacagcgaggctccaaagtctgtagcttga
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integrated database retrieval system
