Arabidopsis thaliana (thale cress): AT1G01960
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Entry
AT1G01960 CDS
T00041
Symbol
EDA10
Name
(RefSeq) SEC7-like guanine nucleotide exchange family protein
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT1G01960 (EDA10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G01960 (EDA10)
Membrane trafficking [BR:
ath04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
AT1G01960 (EDA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
DCB
BIG2_C
Sec7-like_HDS
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
839301
NCBI-ProteinID:
NP_171698
TAIR:
AT1G01960
UniProt:
Q9LPC5
A0A178WBT3
LinkDB
All DBs
Position
1:complement(330588..337912)
Genome browser
AA seq
1750 aa
AA seq
DB search
MASTEVDSRLGRVVIPALDKVIKNASWRKHSKLAHECKSVIERLRSPENSSPVADSESGS
SIPGPLHDGGAAEYSLAESEIILSPLINASSTGVLKIVDPAVDCIQKLIAHGYVRGEADP
TGGPEALLLSKLIETICKCHELDDEGLELLVLKTLLTAVTSISLRIHGDSLLQIVRTCYG
IYLGSRNVVNQATAKASLVQMSVIVFRRMEADSSTVPIQPIVVAELMEPMDKSESDPSTT
QSVQGFITKIMQDIDGVFNSANAKGTFGGHDGAFETSLPGTANPTDLLDSTDKDMLDAKY
WEISMYKSALEGRKGELADGEVEKDDDSEVQIGNKLRRDAFLVFRALCKLSMKTPPKEDP
ELMRGKIVALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASNLMIIFQLSCSI
LLSLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPDFQQKMIVLRFLDKLCVDSQILVDIF
INYDCDVNSSNIFERMVNGLLKTAQGVPPGTVTTLLPPQEAAMKLEAMKCLVAVLRSMGD
WVNKQLRLPDPYSAKMLEIVDRNLEEGSHPVENGKGDGGHGGFERSDSQSELSSGNSDAL
AIEQRRAYKLELQEGISIFNQKPKKGIEFLIKANKVGDSPEEIAAFLKDASGLNKTLIGD
YLGEREDLSLKVMHAYVDSFEFQGMEFDEAIRAFLRGFRLPGEAQKIDRIMEKFAERFCK
CNPKDFSSADTAYVLAYSVILLNTDAHNPMVKSKMTADGFIRNNRGIDDGKDLPEEYLRA
LYERISRNEIKMKDDGLGPQQKQPTNSSRLLGLDTILNIVVPRRGDDMNMETSDDLIRHM
QERFKEKARKSESVYYAASDVIILRFMVEVCWAPMLAAFSVPLDQSDDAVITTLCLEGFH
HAIHVTSVMSLKTHRDAFVTSLAKFTSLHSPADIKQKNIEAIKAIVKLAEEEGNYLQDAW
EHILTCVSRFEHLHLLGEGAPPDATFFAFPQTESGNSPLAKPNSVPAIKERAPGKLQYAA
SAMIRGSYDGSGVAGKASNTVTSEQMNNLISNLNLLEQVGDMSRIFTRSQRLNSEAIIDF
VKALCKVSMDELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSDN
LSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVVVMRKSGAVEIRELIIRCVSQM
VLSRVDNVKSGWKSMFMIFTTAAHDAHKNIVFLSFEMVEKIIRDYFPHITETETTTFTDC
VNCLVAFTNCKFEKDISLQAIAFLQYCARKLAEGYVGSSLRRNPPLSPQGGKIGKQDSGK
FLESDEHLYSWFPLLAGLSELSFDPRAEIRKVALKVLFDTLRNHGDHFSLALWERVFESV
LFRIFDYVRQDVDPSEDDSTDQRGYNGEVDQESWLYETCSLALQLVVDLFVNFYKTVNPL
LKKVLMLFVSLIKRPHQSLAGAGIAALVRLMRDVGHQFSNEQWLEVVSCIKEAADATSPD
FSYVTSEDLMEDVSNEDETNDNSNDALRRRNRQLHAVVTDAKSKASIQIFVIQAVTDIYD
MYRMSLTANHMLMLFDAMHGIGSNAHKINADLLLRSKLQELGSSLESQEAPLLRLENESF
QTCMTFLDNLISDQPVGYNEAEIESHLISLCREVLEFYINISCSKEQSSRWAVPSGSGKK
KELTARAPLVVAAIQTLGNMGESLFKKNLPELFPLIATLISCEHGSGEVQVALSDMLQTS
MGPVLLRSCC
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacggaagtcgattcccgcttaggtcgagttgttatccctgctttggacaag
gtcattaagaacgcctcctggcgtaagcactccaagctcgcccacgagtgcaaatccgtc
atcgaacgccttagatcccctgaaaattcctctcctgttgccgactctgaatctggatcc
tccattcctggaccacttcacgacggaggagccgccgaatactctctcgccgagtccgag
atcatcctcagccctctcatcaacgcctcctccaccggcgttctcaagattgtcgatccc
gccgttgattgcatccagaagcttattgctcatggctacgttcgcggtgaggctgatccc
accggcggacctgaggcgctactcctttccaagctcattgaaaccatctgcaaatgtcac
gagctagacgacgaagggctcgagttgctcgtgctgaagacgctcttgactgcggtaact
tcaatttccctgaggatccatggagattctttgctacagatcgtcaggacttgttatggt
atctacttgggaagcagaaacgtggttaatcaggcgactgctaaagcctcgctcgtgcag
atgtctgttatcgtgttcagaagaatggaggcagattcatccaccgtccccattcagccc
atcgtcgtggccgagctgatggagcccatggacaaatccgaatcagacccatctacgacg
cagtctgttcaaggtttcattaccaagattatgcaggacattgacggagtcttcaattca
gctaacgccaagggcacattcggcggccatgacggggccttcgagacttcattgcctggc
actgccaatcctactgatttgttggattctactgataaggatatgttggatgccaagtac
tgggagatcagtatgtataagtcggccctcgagggaagaaaaggagagctggccgatgga
gaagtggagaaagacgatgattctgaagttcagattgggaataagctgagaagagacgcc
ttcttggttttcagggcactttgcaagctgtccatgaagacgcctcccaaggaagatcca
gagttgatgagagggaagattgtggctctcgagttattgaagattctgcttgagaatgcc
ggtgctgtctttagaaccagcgataggttcttaggcgccatcaagcagtatctgtgtctc
tccttgctgaagaacagtgcttcaaatcttatgatcattttccagctttcctgctcgatt
ttacttagcttggtttcgaggtttcgtgctgggctgaaggcagagattggggtgttcttc
cctatgattgttctaagagtattagagaatgttgctcaacctgatttccaacagaagatg
atagtgcttcggttcttggacaagctctgcgttgattcacagattttggtagatatcttc
atcaactatgattgcgatgtcaactcatccaatatatttgagaggatggtcaatggtctc
cttaagactgctcaaggagtgcctcctggtacagttactaccttgttgccacctcaggaa
gcagccatgaagcttgaagccatgaaatgcttagttgctgttttaaggtctatgggagac
tgggtgaataagcagttgcgtcttccagatccttattcggcaaaaatgctggaaattgtt
gatagaaatcttgaagaaggaagtcatccagtagaaaatggtaagggggatggaggccat
ggtggttttgaaagatcagactctcagtctgaattgtccagtgggaattctgatgcctta
gcaatagagcagcgccgagcttacaagcttgaacttcaggaaggtatttctattttcaac
cagaaacctaagaaaggtattgaatttttaatcaaggcaaacaaggtgggggactcgcca
gaggaaatagcagcttttctcaaagatgcatcagggttgaacaagactttgataggggat
tatctgggggaaagagaagacttatctctgaaagtgatgcatgcatatgtggattctttc
gaatttcaaggcatggaatttgatgaggcaattcgagcctttctccggggctttaggctg
ccaggagaagcacaaaaaatcgatcgtataatggaaaaatttgcagagcgattctgtaaa
tgcaacccaaaggatttttctagcgctgatacggcatatgtcctcgcttactcagtcatt
ttgctcaacacagatgcacataaccctatggtgaagagcaagatgacagctgatggtttt
attagaaacaatcgtggtatagatgatgggaaagatttgcctgaggaatatctacgtgca
ttatatgaaaggatatctagaaatgagataaagatgaaggatgatggtttgggtccgcag
cagaagcagcctacaaactcaagtagattacttggcttagatactatcttaaatattgtt
gttcctaggcgtggtgacgatatgaacatggagaccagtgatgatcttatcaggcatatg
caagagagatttaaagaaaaggctcgcaaatctgagtcagtttattatgcagcctcggat
gtgattatactcagatttatggttgaggtttgttgggctcctatgttggcagctttcagt
gttccacttgaccagagtgatgatgcagtaataacaacattatgtctggagggtttccat
catgccatccatgtcacttctgtaatgtccttaaaaacgcacagagatgcctttgtgact
tcactagcaaaatttacttccctccactctcctgctgatatcaagcaaaaaaacattgaa
gcaataaaggcaatagtaaaactggcggaggaagaaggaaactatctacaagatgcttgg
gagcatatactgacttgtgtttcacggtttgagcatcttcatctcttgggggaaggagcg
cctcctgatgccactttctttgcatttcctcaaacggagtcaggaaactctccactggct
aagccaaattccgtacctgcaattaaagaaagagcacctggaaaacttcagtatgctgca
tctgctatgataaggggttcctacgatggttctggtgttgctggaaaggcttctaataca
gtgacatctgaacagatgaacaacttgatatctaatctaaacttgctagaacaagttggt
gacatgagtcggatatttactcgtagtcaaagattgaatagtgaagccataattgacttt
gttaaagccctctgcaaagtttccatggatgagttacgatctccatctgatccacgggtc
ttcagcctaacaaagattgtggaaatagcgcactataacatgaaccgcataagacttgtc
tggtcgagcatctggcatgtgctctctgatttctttgtgactattggctgttctgataac
ctctccattgcaatttttgcaatggattctttgcgccagctgtctatgaagttcttagag
cgggaagagttggcgaattataacttccaaaatgaatttatgaagccttttgttgttgtc
atgcgcaaaagtggtgctgttgagatcagggaattgattatacgatgtgtctcacagatg
gttttatcccgtgttgacaatgtcaagtcgggatggaagagtatgttcatgattttcacg
acagcagcacatgatgcacataaaaatattgtgttcctgtcttttgaaatggttgagaag
attatccgagactacttcccacacatcacggagacagagacaaccaccttcacagactgt
gtgaattgccttgttgcgttcaccaattgtaaatttgagaaagatattagtctccaagcc
attgctttccttcagtattgcgcaagaaaacttgctgaaggctatgttggttcgtcactg
aggaggaacccaccattatctcctcagggtggaaaaattggaaaacaagatagtgggaag
tttctagaaagtgatgaacatttgtattcttggtttccactgttagccggtttatctgaa
cttagtttcgacccaagagcagaaattaggaaggttgcattgaaagtcctgtttgatact
ctgaggaaccatggtgaccatttcagtctggcgttatgggaacgggtttttgagtctgtt
ttatttcgaatattcgactatgtgcgtcaggacgttgacccatctgaggatgattcaaca
gatcagagaggttacaatggtgaagtcgaccaagagtcttggctttatgagacatgctcg
ttagctctacagctggttgtagacctctttgtaaatttttacaagacggttaaccctctc
cttaagaaggtactgatgttatttgtaagcttgataaaacgtcctcaccaaagtcttgct
ggtgcgggtattgctgcgcttgtccgtctgatgagagatgtcggtcatcaattctctaac
gaacaatggctcgaggttgtgtcatgtatcaaagaagcagcagatgctacatcccctgac
ttctcatacgttaccagtgaagatttgatggaggatgtaagcaatgaggacgaaacaaac
gataattccaacgacgcactgagaagaaggaacaggcagcttcatgctgtcgtcacagat
gccaaatctaaagcttcaattcagatttttgtgattcaggcggtaacagatatctacgac
atgtaccgtatgtctctcacagccaatcacatgttgatgctcttcgacgctatgcacggc
attggatccaacgctcacaaaatcaacgctgatctactcttacgttccaagctccaggag
ctcgggtcgtcccttgaatcccaagaagctcctctgctgcgcctggagaacgaatctttc
caaacatgtatgaccttcttagacaacctcatctcagatcagcctgtgggttacaacgag
gctgaaatagaatcccacctcataagcctctgcagagaggtgttagagttctacataaat
atttcatgttcaaaggagcagtcttcaaggtgggcggttccctcggggtcaggaaaaaag
aaagagctaacagcgcgggctccgctagtggtggctgcaattcagacattgggaaacatg
ggagagtcactgttcaagaagaacttgccggagttgtttccattgatagcgacgttgata
agctgtgaacatgggtcaggagaggtacaagtagctcttagtgatatgcttcagacatca
atgggacctgttctcctccgctcttgctgctaa
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