Arabidopsis thaliana (thale cress): AT1G02790
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Entry
AT1G02790 CDS
T00041
Symbol
PGA4
Name
(RefSeq) polygalacturonase 4
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Module
ath_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT1G02790 (PGA4)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
AT1G02790 (PGA4)
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
839391
NCBI-ProteinID:
NP_171778
TAIR:
AT1G02790
UniProt:
P49062
A0A178WH12
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Position
1:complement(610363..612324)
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AA seq
422 aa
AA seq
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MANARSLVAKANNINVGSLILMALVFGSCVANGEYLGGRRGLAANSGNPTVYDITKFGAV
GDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIAT
TSGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNV
EINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATG
DDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIK
TWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGDSQVAISDILFKNIRGTTITKD
VVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGGLVGALCDNANVIFGGKLSFPMC
PK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcaagaagtttggtcgccaaggcaaacaatattaacgtaggttcattgatt
ctaatggccttggtgtttggttcttgcgtggctaatggtgaatatctcggcggccgccgt
ggtctcgctgctaattccggtaaccccacggtctatgatattactaagtttggagccgta
ggagatggttccaccaatacttttaaggcgtttttgaacacatggatacaagtgtgtgac
agtccagtaccagcaacgctactagttcctaagggaacatttttggctggtccagtcatt
ttcgccggtccatgcaagagcaaagtgaccgtcaatgttataggcacaatcatcgctacg
accagcgggtacgcaactcccgagtggttcttgttcgagcgtgttgacaatctcgtcctc
accggaaccggcacattccacgggaaaggtgaagctgtctggaaagcagatggttgtggt
aaaaaggtccaatgcaatcttcctccaacgtctctcaaattcaggaacatgaaaaatgtt
gaaatcaatggcataagctcggtgaacgcaaaggccttccacatgttcttagtcaaaact
gagaatgttaacatccaaaacattaagcttaccgcaccagctgaaagccccaacaccgat
ggtatccatttgagcaatgcagacaacgttagcatcctcgacagtaccatagcgactgga
gacgattgtgtttcagtcggtcgtggctccaacaacgtaaccgtcgaacgtgtgatttgt
ggtccaggacacggtctaagtgtcggtagtcttggtaagtacaagaacgaggaagacgtt
agcggaatccacgttaacaactgcacgatgattgagaccgacaatggtcttaggatcaag
acatggggtgggtcagacccaagcaaggctgtggacattaagtttgaaaacatcatcatg
cagagtgtcaagaacccaatcatcattgatcaaaactacggttcaagaggcggagattca
caagttgctataagtgatattttgttcaagaacattagaggaacaacaattacaaaagat
gttgttcagattatgtgtagcaaatcggtgccgtgccaaggagtaaacgttgttgacgtg
aacttggactatgtaggcaagacaggaggagagaagaagtcgtcatcaggcggtttggtc
ggagctctttgcgataacgccaatgttatcttcggtggaaaacttagtttccctatgtgt
cccaaataa
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