KEGG   Arabidopsis thaliana (thale cress): AT1G05055
Entry
AT1G05055         CDS       T00041                                 
Symbol
GTF2H2
Name
(RefSeq) general transcription factor II H2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03022  Basal transcription factors
ath03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AT1G05055 (GTF2H2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT1G05055 (GTF2H2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT1G05055 (GTF2H2)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT1G05055 (GTF2H2)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AT1G05055 (GTF2H2)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AT1G05055 (GTF2H2)
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 Tfb4 IBR
Other DBs
NCBI-GeneID: 839332
NCBI-ProteinID: NP_683275
TAIR: AT1G05055
UniProt: Q9ZVN9 A0A178W5Z7
LinkDB
Position
1:complement(1448631..1450901)
AA seq 421 aa
MSNQRKRSNDEREEEDDEDAEGIGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQY
RRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFFD
QNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQV
PSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLY
SVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGY
MCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLGK
SCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLME
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagtaatcaaagaaagagatcaaacgatgaaagagaagaagaggacgacgaagatgcg
gaaggtatcggcgagtgggagagagcttatgttgacgaccgatcctgggaggagttgcaa
gaggatgagtctggacttttacggccaattgataacagtgccatttaccatgctcagtat
cgccgccgtcttcgtatgctctccgccgctgctgctggtactcgtatccaaaagggactt
attcgatatctctacatcgtcattgacttctctcgggcagctgcggaaatggatttcaga
ccaagccggatggctataatggccaaacatgtcgaagctttcattagagagttctttgac
cagaatcctctgagtcaaattgggttggtctctataaaaaatggagttgcgcatacatta
acagatcttggtggtagtcctgagactcacatcaaagcgttgatggggaagttggaagct
ttgggtgactcctctttgcagaacgctctggaacttgtacatgagcatctcaaccaggtt
ccatcttatggtcaccgcgaggttctgatattgtactcagctttatgcacatgtgatcca
ggcgatatcatggagaccattcaaaaatgcaagaaatccaaattaagatgttctgtaatt
gggctctctgcagaaatgttcatatgtaaacacctctgccaggaaactggcggattgtat
tcagttgcagtggacgaggtgcatctaaaggatcttctgcttgaacatgcgcctccacct
ccggcaatagcagaatttgcaattgcaaatttgatcaagatgggtttcccacaaagagct
gctgagggttcaatggcgatttgttcgtgtcataaggaagttaagattggagctggttac
atgtgcccaagatgcaaagctcgggtatgtgacctccctacggaatgcactatctgcggt
ctaacacttgtttcttcgccgcatttggcgagatcataccatcatctcttcccgattgct
ccatttgatgaggtgcctgcactttcaagtctgaatgataatcggagaaaattgggaaag
agttgttttggttgccaacagagcctaattggtgcagggaataaacccgtcccatgcgta
acatgtcgtaaatgcaagcactatttctgtctggactgtgacatatacatccacgagagc
ttacacaactgtcctggctgtgagagcattcaccgtcccaaatcagtttctttgatggaa
gaatga

DBGET integrated database retrieval system