Arabidopsis thaliana (thale cress): AT1G06110
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Entry
AT1G06110 CDS
T00041
Symbol
SKIP16
Name
(RefSeq) SKP1/ASK-interacting protein 16
KO
K10290
F-box protein 3
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT1G06110 (SKIP16)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
AT1G06110 (SKIP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF525
SMI1_KNR4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
837120
NCBI-ProteinID:
NP_563759
TAIR:
AT1G06110
UniProt:
Q9LND7
A0A7G2DNR6
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Position
1:complement(1853059..1855378)
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AA seq
436 aa
AA seq
DB search
MGLEDAGDLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLNISTPLDPH
GDPAPSFKRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDL
QEFETSLKVKLPLPTRLLYRFVDGQELSSPNGLDGSLGLIGGYSAYSHDVNVYLLPLKEV
MRETKESFMRDLGFSSRLDLIVMAASVVASLKIFLLDCTTGQLFTGTSNRQLLPCVPDAL
VRSVHDTNGDQQQDAMLLWLEEHGRRLQTGTINVRQQNNVKSISLFPEIPPLCSVSVTNG
VQVRASSVFIPEISNLRDQPPAYWYAYSIRMSLMPEGCILNGTHHSSCQLYWRHWVIRAD
NEVIDNVNGEAVIGKYPLLQAGEEEFVYESCSSFPTTAGSIDGSFTFVPGSLRDPKGSQF
EVKVVEFPLELPDYIF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggtctagaggatgctggagatttggttctccacatcgtcttatccaaaatcggccct
gaaaacaccgcgagagtggcttgtgtcagtaaacgccttaaggtctccgcctccgaggaa
tctctctggtctatcttctgctccaatgatcttaatatctctactcctctcgatccccat
ggagatcctgctccttccttcaagagagcatatcaattgtggagggagtcatttagaatg
tatccttggaatctggttaaaagagttagactttgttgggacaacctcaaacaatggttg
accttaaacttccctgaagcaaaggcaacactgaggaaaggtgtcacagaagatgatctt
caagaattcgagacttctctcaaagtgaaacttcctttgcccacaaggcttctctaccgt
ttcgttgatggtcaagagctttcttcccccaatgggcttgatggctctttggggcttata
ggtggctattccgcttattctcatgacgttaatgtctacttgctacctcttaaggaagtg
atgagggagacaaaggaaagtttcatgcgcgacctcggtttctcgagtagattagacctt
attgttatggctgcatccgtagttgccagtctgaaaatatttttattagactgcacaacc
ggacagctttttactgggacaagtaaccgccaattgcttccttgtgtacccgatgctttg
gttagatcggttcatgataccaacggcgatcagcaacaggatgccatgctgctttggttg
gaagaacatggccggcggttacaaaccggcactataaatgtccgtcaacagaacaatgtc
aagagtatcagtttgttcccggagattcctcccttgtgttctgtctccgtaactaatggt
gtgcaggtacgtgcttcgtctgtttttatcccggaaatatcgaaccttcgggatcagcca
ccggcatactggtatgcatattcaatccggatgtctctcatgccagaaggatgcatcttg
aatgggacacatcatagctcttgccaactgtattggagacattgggttatccgagctgat
aatgaagtgatagataatgttaatggagaagctgtcataggaaagtacccgctcttacaa
gccggggaggaagagtttgtgtatgagagttgttccagttttccgacaactgctggatcc
attgatggctctttcacctttgtacctggaagtttgagagatccaaaagggagtcaattc
gaagtcaaagtcgtagagtttcctctggagttaccggactacatcttctga
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