Arabidopsis thaliana (thale cress): AT1G08370
Help
Entry
AT1G08370 CDS
T00041
Symbol
DCP1
Name
(RefSeq) decapping 1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT1G08370 (DCP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G08370 (DCP1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AT1G08370 (DCP1)
mRNA degradation factors
5'-3' decay
Decapping complex
AT1G08370 (DCP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
CD1375-like
Motif
Other DBs
NCBI-GeneID:
837357
NCBI-ProteinID:
NP_563814
TAIR:
AT1G08370
UniProt:
Q9SJF3
LinkDB
All DBs
Position
1:2638037..2640663
Genome browser
AA seq
367 aa
AA seq
DB search
MSQNGKIIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIELSQWSRKDVEG
SLFVVKRSTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQGPYLLYRNASQEVNGIWFYNK
RECEEVATLFNRILSAYSKVNQKPKASSSKSEFEELEAKPTMAVMDGPLEPSSTARDAPD
DPAFVNFFSSTMNLGNTASGSASGPYQSSAIPHQPHQPHQPTIAPPVAAAAPPQIQSPPP
LQSSSPLMTLFDNNPEVISSNSNIHTDLVTPSFFGPPRMMAQPHLIPGVSMPTAPPLNPN
NASHQQRSYGTPVLQPFPPPTPPPSLAPAPTGPVISRDKVKEALLSLLQEDEFIDKITRT
LQNALQQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaacgggaagataatcccaaatctggaccaaaacagtacgaggctcctcaat
ctcacagttctccagcggatcgatccatacatcgaggaaatcctcatcacagccgctcat
gtcactttctatgaattcaacattgagctcagccaatggagtcgtaaggacgttgaagga
tctttgtttgttgtcaaaagaagtacacaacctcgatttcagtttattgtgatgaatcgt
cgtaatacagataatctggtggagaatctcctgggagattttgagtatgaagtacaaggt
ccatatttactttaccgtaatgcatctcaagaagtaaatggcatttggttctacaataaa
cgtgaatgcgaggaggtagcaactcttttcaacagaatactcagtgcatattccaaggtt
aaccagaagccaaaggcctcatcttcaaagagtgagtttgaggaattggaagctaagcct
acaatggcagttatggatggtcctcttgaaccatcatcaactgctagggatgcccctgat
gatcctgcttttgtcaacttctttagctcaacgatgaatcttgggaacactgcgagtggg
tcagcaagtggaccttaccaatcatcagcgattcctcaccaacctcaccagcctcaccaa
cccaccattgctcctcctgtagcggcagcagcacctccacagatacaatcaccaccgcct
ctacaatcctcctctcctctgatgactctctttgacaacaaccctgaagttatcagcagc
aactccaacattcacacagatttggtgacgccgtctttctttggccccccacgaatgatg
gcacagccacacctcattcctggtgtatctatgcccactgctcctcctctcaatcctaat
aatgcgagtcaccagcagcggtcatatggtactccggtgctccagcctttcccaccccca
actccaccaccatcactcgctcctgcacccactggtccggttatcagcagagacaaagtg
aaggaagcccttttatccctgttgcaggaggatgaattcattgacaagattacccgaact
ttacaaaatgcacttcaacaatga
DBGET
integrated database retrieval system
