Arabidopsis thaliana (thale cress): AT1G08400
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Entry
AT1G08400 CDS
T00041
Name
(RefSeq) RINT-1 / TIP-1 family
KO
K20474
RAD50-interacting protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G08400
Membrane trafficking [BR:
ath04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
AT1G08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Prefoldin_3
Motif
Other DBs
NCBI-GeneID:
837360
NCBI-ProteinID:
NP_172316
TAIR:
AT1G08400
UniProt:
Q8GXP1
A0A654EIM8
LinkDB
All DBs
Position
1:complement(2643019..2646048)
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AA seq
804 aa
AA seq
DB search
MLPMEHPLPLSFVLPNPATLPGLALGFIDGNFVDLQDLLLRASTLTSNLNHDCSDLNDRL
LHLRTDLTKHAVSWISTSLSAKVSLEDLRLNLESLLCLPTDSVGKQTNWELQQVVEELCR
IQNRRKYFVTALKLESLVGDLEDSVFHPISKRKGSTLQDLALKQERFSHAIKTMNEIEEI
LGDVTRHHSRWRRLVDSVDSRVDKSLSVLRPQIIADHRAFLSSLGWPPKLATSKVEHGEV
DSIPNPLLLMQGDKKESYSQSFLLLCGLQQHNTQKEKRKKLNMTKETDNDGLWATDELVK
PVASRMEYHFLKWAEQPEFIFELVYKVTRDFADGVDDFLQPLIDRAMLVSCSAKEAWVSA
MVQMLSGFLEKKVFPGLIDMYKEKHMKSEGISSWFHLVDQMVTFDKRMQSFVNTDTCLSY
EGSSTAFSQGISVMGLFCKKPEWLKTWGKIELKDAYRKSKEDIKNEKAWVIDSERTRLGN
ESNSQSAKYVLSTREDYKAPLVADSFLNRTWRLIDHGLSLPAILPRIQFIRATATRFLWC
IFKILLLEFKKTDLSHYGLSEDTLIQACGPVNAARYLESKLREWSDDLVFVEMWAAETSV
KVDRKPEVSCQGCFFGEELKSLVELETNWLMEIITVFLHQFDNLCSDHFHNNAVSWDEDV
ITSSSNLTVSQGVAEALDNLRRHLCVLHLNMNPKDFLDLWRNLAEGLDHYVSRKFFSGEP
VLRRQKFDRFEVDAEALLTVLKPYCVRPGAFFPRVREILRLLRMHEEEKARLRGALSRSG
NTCLKLFGISNLSPQLVEQFCRSY
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgatggaacatccacttccactgtcgttcgtcttgccaaacccggccaccctt
cccggtctcgcactaggctttattgacggtaatttcgtagacctccaagatctgctcctc
cgcgcttcgactctgacgtccaatttaaaccacgactgttctgatctaaacgaccgtctt
ctccatctccggacggatctcacgaagcacgccgtttcctggatctcaacctcactttcc
gctaaagtttcactcgaagatttgagattgaacctggagagcctcctctgtctccctacg
gattctgtcggaaagcaaacgaattgggagttacagcaagtcgtagaggaattgtgtcgt
atacagaatcggcgtaaatatttcgtgactgccttaaagttggaaagtcttgttggcgat
cttgaagattctgtgtttcatccgataagtaaacgcaaaggaagtacgcttcaagatctt
gcattgaagcaagagagattcagtcatgctattaagaccatgaatgagattgaagaaata
cttggtgatgttacaaggcatcactcacggtggcgtcgccttgtagattctgttgatagt
agagtagataaaagtctgtctgttcttcgtccacagattatcgcagatcaccgagctttt
ctctcatctcttggctggccaccaaaacttgcaacatccaaagtcgagcatggagaggtt
gatagtatccctaatcctctactcttgatgcaaggagataaaaaagagtcttattcccaa
agctttctactcctctgtggtttacagcaacataatacgcagaaggaaaaacgaaagaag
cttaatatgaccaaagaaactgataatgatggactttgggcgaccgatgaactagttaaa
ccggttgcatctcggatggagtatcattttctaaaatgggctgagcaacctgagtttatt
tttgaacttgtctataaagttacaagagactttgctgatggggttgacgatttcttacag
cctttgattgatagggctatgttagtaagctgtagtgctaaagaagcttgggtttcagcg
atggtccaaatgctatctggtttcttagagaaaaaagtttttcctgggcttatagatatg
tacaaggagaagcacatgaaatctgaaggtatttcatcgtggttccatcttgtcgatcag
atggttacatttgataagcgaatgcagtcttttgtgaatacagatacttgtctatcttat
gaaggctcttcgacagcgttttctcaaggtatatcagtaatgggactgttttgtaagaaa
cctgagtggctcaaaacctgggggaagattgagctaaaggatgcttatagaaaaagtaaa
gaggatattaagaatgagaaagcttgggtaattgatagtgaaagaactagacttggtaat
gaatccaactcacagtctgcaaagtatgttctatctacaagagaagattataaagcgcca
ttagtagcagactcttttcttaataggacttggaggttgatagaccatggtctatctcta
ccggccattctaccaaggatccaatttataagagctactgccaccagatttctctggtgt
atattcaaaattctgttattggagttcaaaaagactgatctctctcattatggtttgtct
gaagatacactgatacaagcatgtggaccggttaatgctgctcggtatcttgaatcaaaa
ctacgagaatggagtgatgatttggtttttgtagagatgtgggctgccgaaaccagtgtc
aaagttgatagaaaacctgaagtttcctgccaaggctgcttttttggggaagaactgaaa
agccttgttgagttggaaaccaattggcttatggagattataacagtttttctccaccaa
tttgacaatctttgcagcgaccacttccacaacaatgcagtttcatgggacgaagacgtc
attaccagctccagcaatttaacagtgtctcagggtgtcgcagaagcattggacaattta
agaaggcatctgtgtgttcttcatctaaacatgaacccgaaagacttcttggacttgtgg
agaaatctcgcggaagggcttgaccattatgtttctcgtaaatttttctcaggagaacct
gttttacggagacaaaagtttgataggtttgaagttgacgcagaggcacttcttactgtg
cttaaaccttattgtgttcgtcctggtgcatttttccctcgtgtgcgagagattcttagg
ctgttgaggatgcatgaggaagaaaaggcacgattgagaggagctctaagtcgaagtgga
aatacttgtctaaagttgtttggtatttctaacttgtctcctcaacttgtggaacaattt
tgtaggtcttactag
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integrated database retrieval system
