Arabidopsis thaliana (thale cress): AT1G08490
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Entry
AT1G08490 CDS
T00041
Symbol
CPNIFS
Name
(RefSeq) chloroplastic NIFS-like cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00450
Selenocompound metabolism
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AT1G08490 (CPNIFS)
Enzymes [BR:
ath01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
AT1G08490 (CPNIFS)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
AT1G08490 (CPNIFS)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
837370
NCBI-ProteinID:
NP_172325
TAIR:
AT1G08490
UniProt:
Q93WX6
A0A178WGK3
Structure
PDB
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Position
1:complement(2685659..2688658)
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AA seq
463 aa
AA seq
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MEGVAMKLPSFPNAISIGHRSFSRVRCSSSLSVCSAAAASSATISTDSESVSLGHRVRKD
FRILHQEVNGSKLVYLDSAATSQKPAAVLDALQNYYEFYNSNVHRGIHYLSAKATDEFEL
ARKKVARFINASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAEHHSCIVPWQ
IVSQKTGAVLKFVTLNEDEVPDINKLRELISPKTKLVAVHHVSNVLASSLPIEEIVVWAH
DVGAKVLVDACQSVPHMVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLHSMPPFLG
GGEMISDVFLDHSTYAEPPSRFEAGTPAIGEAIALGAAVDYLSGIGMPKIHEYEVEIGKY
LYEKLSSLPDVRIYGPRPSESVHRGALCSFNVEGLHPTDLATFLDQQHGVAIRSGHHCAQ
PLHRYLGVNASARASLYFYNTKDDVDAFIVALADTVSFFNSFK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtggctatgaaactcccgtcgttccctaacgccatctccatcggccaccgg
agcttctcccgcgttcgttgctcctcttcgctatccgtttgttccgccgccgccgcttcc
tccgccaccatctccactgattccgaatccgtctctctcggccatcgcgttcgaaaagat
ttccgaattctccaccaggaagtgaatgggtcaaagcttgtgtacttagacagtgctgca
acttctcagaagccagcagctgtattggacgctttgcagaattactatgagttctataat
tccaacgttcatcgaggaatacactatttaagtgctaaagctacagatgaatttgagtta
gctaggaaaaaagttgctcgtttcatcaatgcttctgatagtagagagattgtttttaca
aggaatgccactgaagccatcaatcttgtagcttattcatggggtctttctaatcttaaa
ccaggagacgaggttatacttacagttgctgaacatcatagttgcattgttccttggcaa
attgtatctcaaaaaactggagcagttctaaagtttgtgactttgaatgaggatgaagtc
cctgacataaacaagttgagagaattgatttctccaaagacaaagctcgtcgctgttcat
catgtttctaatgttcttgcatcttctcttcctattgaagagattgtggtatgggcacac
gatgttggagcgaaagttctagtggatgcttgtcaaagtgttcctcacatggtggttgat
gtccagaagcttaatgctgattttctagttgcgtcttctcacaagatgtgtggacctaca
ggcattgggttcttatatggtaagagtgatcttctacattccatgcctccattcttaggt
ggcggagaaatgatctcagatgtatttcttgaccattcaacttatgcggaacctccatcc
agatttgaagctggaacacctgcaataggagaagcaattgcccttggagcagcagttgat
tacttgtcaggaattggcatgccgaaaatccatgaatatgaggtagagattggtaagtat
ttgtacgagaaactgtcttccctgcctgatgtgcggatatacggtcccagaccttctgaa
agtgttcacaggggtgctctttgttccttcaatgtggagggcttgcacccaactgatttg
gcaacctttcttgatcagcagcacggagttgcaataaggtcaggacaccactgcgcacag
ccactccaccggtatcttggagtgaatgcaagtgcacgcgccagcctctacttttacaac
acaaaggatgacgttgacgccttcatcgttgcgctggcagacactgtgagcttcttcaac
tctttcaaataa
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