Arabidopsis thaliana (thale cress): AT1G08600
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Entry
AT1G08600 CDS
T00041
Symbol
ATRX
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K10779
transcriptional regulator ATRX
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT1G08600 (ATRX)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G08600 (ATRX)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
AT1G08600 (ATRX)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
AT1G08600 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
837382
NCBI-ProteinID:
NP_001184937
TAIR:
AT1G08600
UniProt:
F4HW51
A0A178VZQ9
LinkDB
All DBs
Position
1:2723677..2733613
Genome browser
AA seq
1479 aa
AA seq
DB search
MEANEESLKGKIEKLEGKEVIVESKEDEMDIIIEENREAEQEVMEVKARDGRGEQNDVLM
EENNNQGEQKDEEMQDASSRSESSDFNSDEDEQILSRRDDELDLEKPLSEEEIDELISDL
LAVESKAAEAQEALEKESLSKVESEVREELAQALRGDELDEAVAAEMMTFKDEWEATLDE
LETESATLLEQLDGAGIELPKLYEMIESQAPNGCYTEAWKQRAHWVGTQVTKETVESLAN
AERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGAVKESLAGTSELDWSSLNKVFSEKRD
ESVSFGSKQWASVYLASTPHQAAAMGLEFPGVNEVEEIEEIDASLADPFLADAIDNEREL
ALTEEQKTNYIRVKEEDDITCDRVLQLRLKRKRRKKRSKQVIRCAAENMDDDSVYLDGNN
TTPNFAKDQVKSPETSTQVHNSEVNIEENGNFSNSDVDKMTPSTHINVDAKRDDSQNPAN
NFRCTACNKVAVEVHSHPLLEVIVCMDCKRSIEDRVSKVDDSLERHCEWCGHIADLIDCR
TCEKLFCASCIKRNIGEEYMSEAQSSGWDCCCCSPIPLQRLTLELEKAMRDKKSIELSSD
SSSDSSSDNNSVDTDADVNVTISSKKKSKKKIRRIIDDAELGKDTRTKIAIEKARQERLR
SLQFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVREIGEEAVRVPRSISAKLK
VHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLK
TALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGY
TNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRI
ALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRS
HILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGFSDGRTDER
MRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQ
RTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQS
IPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCT
LISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEE
KIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKSEAVTEISKQNEAGHSN
LVEQAILWTKKATLSRVGGDKLMENLLQRHGPNWISSFHEHETLLQENEEERLTKEEKDM
AWEVYRRALEWEEVQRVPFSESPVVPKPSPSTQTEPLPQPKGFNRSRFVNRNCTRIAHQL
TLISQGLKVGSSTVCGECGRVIRWEDVIPASKLSAVIVN
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaacgaagaaagtttgaagggaaaaattgaaaagctagagggaaaggaggtt
attgtggagtcaaaagaggatgagatggatataataatagaagaaaatagggaagcagaa
caggaggtaatggaggtgaaagcaagagatggaagaggggagcaaaatgatgtactgatg
gaagaaaacaacaatcagggtgagcaaaaagatgaggagatgcaagatgcttctagtaga
tctgaaagttctgacttcaattcagatgaagatgaacaaattctgtcccggcgtgatgat
gagttggatcttgagaaacctttgagcgaggaagaaatagatgagttaatttcagatctt
ctggcagttgagagcaaggctgcagaagctcaagaagcactcgaaaaggagtctctttct
aaagtagagagtgaagttagggaggaattagcacaagcactccgtggtgatgagttggat
gaagctgttgctgctgaaatgatgacttttaaagacgaatgggaggcaactcttgatgag
cttgaaacagaaagtgcaaccttgttggagcaacttgatggtgctggaatcgagcttcca
aaattgtacgaaatgatagaaagtcaagcccctaatggttgctacactgaagcttggaag
caaagagcccattgggttggtactcaggtgacaaaagaaactgtggaatcattggctaac
gctgagaggtttctgcacactcatcggcctgtccgaaaacgacatggaaaacttttggag
gagggagctagtggttttctggagaaaaaactcgctgatggtgctgttaaagaatctcta
gctggaacatctgagcttgactggtcgtctctaaacaaagtgttttcggaaaaaagggat
gagtctgtttcctttggtagtaagcagtgggcttctgtttacttggcaagcactccacac
caagctgcagccatgggattagaatttccaggagtcaatgaggtggaggaaattgaagag
attgatgcaagcttagcagacccatttttagctgatgcaattgacaacgaaagagaactt
gcccttactgaagaacaaaagacaaattatataagggtcaaagaagaggatgatataact
tgtgatcgtgtacttcaacttcgtttgaaacggaaaagacgcaagaaaagatctaaacag
gttattaggtgtgcggcagagaatatggatgatgattctgtgtatttggatgggaataat
actaccccaaattttgccaaagatcaagtgaaaagtccggagactagcactcaagttcat
aatagtgaagtcaacatagaggaaaacgggaatttttctaattcagatgtagataagatg
acccccagcacacatattaatgtagatgccaagagagatgattcacagaatccagcaaac
aattttaggtgtactgcctgtaataaagtagctgtggaagtgcatagtcatcccctttta
gaagtaatagtttgcatggattgcaaacgttcaattgaagatagagtttctaaggttgat
gactctttggaacgtcattgtgaatggtgtggtcatattgctgacttaatagattgtagg
acatgcgaaaaacttttctgtgcatcatgtataaagaggaatattggtgaagaatacatg
tctgaagctcaatcctctggttgggattgttgttgttgctctccaattcccttgcaaaga
ttgacactggaactggagaaagctatgagagataaaaagtcaatagaattgagctctgat
tcgagttctgattccagctctgataacaattctgttgatacagatgctgatgtcaatgta
acaatcagctcaaagaagaaatcgaaaaagaaaattcggcggataatcgatgacgctgaa
ctagggaaagatacgagaacaaagattgcaatcgaaaaggcacgacaggagcgccttagg
tccttgcagttttctgccagatacaaaacaattagctctatgggagacgtgaaatctatt
ccagaaggtgcggaagttgaggttcttggtgatgctcacagtggttacatagtgaatgtg
gttagggagattggtgaagaagctgtgagggttcctcgtagcatatctgccaaactaaaa
gtccatcaggtaacagggataagatttatgtgggaaaatattattcagtctatcagcaga
gtcaagtctggtgataaaggtcttggttgcattctagcacatacaatgggcctgggcaaa
acttttcaggttatagcattcctgtacaccgcaatgagatgtgttgatttagggttgaaa
actgctcttattgtgactcctgtaaatgtgttgcacaattggcgaagtgagtttgagaag
tggatgccttcagaagtgaaaccgcttcgcatttttatgcttggagatgtttcaagggag
agaagatttgatttgctaacaaagtggcgaaagaagggtggagtctttttgatgggatat
acaaattttagaaacctgtctcttgggaggggggtgaaggacttaaatgcggccagaggg
atctgtaatgccttgagggatggacctgatatacttgtttgcgacgaggctcacatcatt
aagaacaccaaggctgacacaacgcaagcattgaagcaagttaaatgccagagaagaatt
gccttaactggctcaccccttcaaaacaatctcatggagtattattgtatggttgatttt
gtgagagaaggattcttgggaagtagccctgagtttagaaaccgcttccaaaatccaata
gaaaacggacagcatatgaattcaactgcggaggatgtaaaaattatgaaccagaggtca
cacattctgtatgagcaattgaaaggttttgtgcaaagaatggatatgaatgtggtgaaa
aaggatctgccacctaaaacagtcttcgtaatatctgtcaagctatctcccttgcaacgg
atattgtatcagagatttcttgagctttatgggttcagcgatggaagaacagatgaaagg
atgagaaaaaacttttttgctgcttaccaggtcttggctcagattttgaatcatccaggg
attccgcaattaagaagtgaagatagcaagaatggtcgtcgtggtagcattgttgatatt
ccagatgactgttcaagtgatgaaaatatagactacaacatggttacaggagagaaacag
agaactatgaatgatctgcaggataaagttgatggatacctccagaaggattggtgggtc
gacctacttcaaaaaaataattataaggtgtcggacttcagtggcaaaatgattctgcta
ttggatattttatctatgagtgctgatgtgggggataaggcgcttgtgtttagccagagt
atcccgacattggatctcatagaactttatctttcaagagtacctcggcatgggaaacaa
ggaaagttctggaaaaaggggaaagactggtatagaattgatggaaaaactgaaagctca
gaacgccagaagttggttgataggtttaatgagcctgacaacaaaagagtgaaatgtaca
ctaatttcaaccagagcgggatcccttggaattaacctttatgctgctaaccgtgtgatc
atcgtcgatggttcatggaatccaacctatgatcttcaagctatatttcgagcttggagg
tatggccaaaagaagcccgtatttgcgtacagattgatggcacgtgggactattgaagaa
aaaatatataaacgtcaggtaaccaaggaagggctagctgcgagagtagtggatagacaa
caagtgcacaggactatctccaaagaagagatgttacatctttttgaatttgacgatgat
gatgaaaaatctgaagccgtaactgagataagcaagcaaaatgaagcgggacatagcaat
ctggtggagcaagcaatcttgtggacaaagaaggccactttatctcgtgttggtggcgac
aaattgatggagaacttactacagagacacggccccaactggatttccagtttccatgag
cacgagacattgctacaagagaatgaagaagaaagactgacaaaggaagaaaaagacatg
gcctgggaagtttataggagagcacttgagtgggaggaagttcaacgggtcccattcagt
gaatctccagtggttccaaaaccttctccttccacacaaacagagcccttgccccagcca
aaggggttcaacaggagtcgttttgtaaaccgcaactgcactagaatcgcgcaccagctt
acactcataagccaaggattaaaagtcggcagcagcacagtctgtggggagtgtgggcgc
gtcataaggtgggaagatgttatacccgcatccaaactttcagcggtaattgtaaactaa
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