Arabidopsis thaliana (thale cress): AT1G10390
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Entry
AT1G10390 CDS
T00041
Name
(RefSeq) Nucleoporin autopeptidase
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G10390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G10390
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G10390
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT1G10390
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AT1G10390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
837579
NCBI-ProteinID:
NP_001320682
TAIR:
AT1G10390
UniProt:
Q8RY25
A0A178W2Q0
LinkDB
All DBs
Position
1:complement(3406956..3412874)
Genome browser
AA seq
1041 aa
AA seq
DB search
MFGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTSAPFAAQSGSSIFGSTS
TGVFGAPQTSSPFASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQ
SNPFGNSTQQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATSTPSFGASSTPAFGA
TNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASNTPAFGASG
TPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGGSSTPSFGASNTSSFSFGSSPAF
GQSTSAFGSSAFGSTPSPFGGAQASTPTFGGSGFGQSTFGGQQGGSRAVPYAPTVEADTG
TGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDKGGPLPAGQSPGNAGFGISPSQPNP
FSPSPAFGQTSANPTNPFSSSTSTNPFAPQTPTIASSSFGTATSNFGSSPFGVTSSSNLF
GSGSSTTTSVFGSSSAFGTTTPSPLFGSSSTPGFGSSSSIFGSAPGQGATPAFGNSQPST
LFNSTPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQNSIFNKPSTGFGNMFSSSSTLTTSS
SSPFGQTMPAGVTPFQSAQPGQASNGFGFNNFGQNQAANTTGNAGGLGIFGQGNFGQSPA
PLNSVVLQPVAVTNPFGTLPAMPQISINQGGNSPSIQYGISSMPVVDKPAPVRISSLLTS
RHLLHRRVRLPARKYRPGENGPKVPFFTDDEESSSTPKADALFIPRENPRALVIRPVQQW
SSRDKSILPKEQRPTAPLHDNGKSPDMATDAANHDRNGNGELGATGERIHTSVNANQKPN
GTTRSDQASEKERPYKTLSGHRAGEAAIVYEHGADIEALMPKLRQSDYFTEPRIQELAAK
ERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNTREVIVYMDESKKPAV
GQGLNKPAEVTLLNIKCIDKKTGKQFTEGERVEKYKMMLKKKAEAQGAEFVSFDPVKGEW
KFRVEHFSSYKLGDEDEEDGV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcatctaatccttttggacagtcatctggtaccagcccatttgggtctcaa
tctttgtttggtcagaccagcaatacaagtagtaataatccctttgctccagctacaccg
tttggcacgtctgctccttttgctgcacagtcgggaagttcaatattcggaagcacttca
accggtgtttttggtgcacctcaaacatcctctccctttgcctccaccccaacttttgga
gcttcttcatcaccagcatttgggaattctactccggcctttggagcatctccagcatct
tcaccttttggtggatcttctggttttgggcagaaacctttgggattttcaacgcctcag
tcaaatccttttggaaactccacgcagcaatcccaacctgcatttggaaacacctctttt
ggttcgtctacaccttttggtgccactaacacgcctgcctttggcgctccaagcacgcct
tcttttggcgccacaagcacaccctcgtttggtgcatcaagcacgcctgcctttggtgcc
acaaacacgcctgccttcggtgcctcaaactctccctcctttggcgccacaaacacacct
gcatttggcgcgtcaccgactccagcttttggtagcactggcaccacgtttggtaacact
ggctttggttctggaggtgcttttggagcttcaaacacccctgcttttggtgcatcaggc
actccggcttttggtgcatcaggcactcctgccttcggtgcatcaagtactcctgccttt
ggggcatccagtactcctgcctttggggcatccagtactcctgcctttgggggatctagt
actccttcttttggtgcgtcaaatacctcatcctttagttttggctcgtctccagctttt
ggccagtctacatcagcctttggtagcagcgcctttggctctacaccatctccctttgga
ggtgcgcaggcttcaacccctacatttgggggttctggttttggtcaatcaactttcggt
ggtcaacaagggggcagtcgagctgtgccttatgcaccaactgttgaggcagacacaggg
accggcactcagcctgctggaaagttggaatctatttctgccatgccagcatacaaagag
aaaaactatgaggagctgaggtgggaagattaccagcgaggagataaaggtggaccactt
cctgctggccagtctcctggcaatgccggatttggtatatcaccttctcaaccaaatcca
ttttctccatcaccggcgtttggtcagacatcagcaaatccaacaaaccctttttcgagc
tcaacatctaccaacccttttgcccctcaaaccccaacaattgctagttcgagttttgga
acggctacctcaaattttggttcctcgccctttggtgtaacatcttcttccaatcttttt
ggttcaggttcatcaactaccacatccgtttttggatcatcctccgcttttggaacaacg
acaccatcaccgttatttggttcatcaagcactcctggatttggctcttcttcatcaatc
tttggttcagctcctggtcagggggcaactccagcatttggcaacagtcagccatctact
ctgttcaattcaaccccttcgaccgggcagactggttctgcgtttggacagactggttct
gcttttggacagttcggacagagtagtgctcctgcatttggccaaaatagcatttttaat
aaaccttccactggatttggaaacatgttttccagttcttcaacattaaccacgtctagc
agctctccctttggacaaacaatgcctgctggtgtgacaccctttcaatcagctcagcca
ggtcaagcatcaaatggttttggtttcaacaacttcggtcaaaatcaagcagctaatact
actggaaatgctggtggactggggatttttggtcaaggcaacttcgggcaatcgcctgct
ccgctgaactctgttgttttgcaaccagttgctgtgacaaacccatttggaacacttcct
gctatgcctcagatttcaataaatcaaggtggaaattcaccttccattcaatatggaatc
tccagcatgcctgttgttgacaaacctgctcctgttagaatatcatctctcctgacttct
cgacacctattacacaggcgggtcaggctgccggcaagaaagtaccgtcctggcgagaat
ggtccaaaggttccatttttcactgatgacgaagagagctcaagtacaccaaaggcggat
gctcttttcattccaagggagaaccctagagctctagttatacgcccagttcaacagtgg
tcttcaagggataaatcaatacttccaaaggaacaacgcccgactgctccattacatgac
aatgggaagagtcccgacatggccactgatgcagcaaaccatgacagaaatggtaacgga
gaacttggtgctactggggaaagaattcatacatcagtcaatgcaaatcagaaaccgaat
ggcacaacacgctcagatcaggctagcgagaaagagcgtccctacaaaactctaagtgga
cacagagcaggagaagccgcaattgtttatgagcacggtgcagatatcgaggctcttatg
ccgaagctacgacaatctgattatttcacagagccacgtatccaagaactagcagctaag
gaaagagcggatccgggttactgcaggcgggtaagagactttgtagtgggacgacacggt
tatggtagcataaagttcatgggagagacagatgtgcgtaggctagacttggaatcactg
gttcagttcaatacacgggaagtgattgtatacatggacgagagcaagaaaccggctgtt
gggcaaggtttgaataaaccggcggaagtaacgttgctgaacataaaatgtattgacaag
aagacagggaaacagtttactgaaggagagagagtggagaagtataagatgatgcttaag
aagaaagctgaggcacaaggagctgagtttgtgtcatttgatccagtgaaaggcgaatgg
aagtttcgggtcgagcattttagttcgtataagctgggcgacgaagatgaagaagatgga
gtttag
DBGET
integrated database retrieval system
