Arabidopsis thaliana (thale cress): AT1G10520
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Entry
AT1G10520 CDS
T00041
Symbol
Pol{lambda}
Name
(RefSeq) DNA polymerase lambda (POLL)
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03410
Base excision repair
ath03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT1G10520 (Pol{lambda})
03450 Non-homologous end-joining
AT1G10520 (Pol{lambda})
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G10520 (Pol{lambda})
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT1G10520 (Pol{lambda})
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
AT1G10520 (Pol{lambda})
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
AT1G10520 (Pol{lambda})
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
NTP_transf_2
Cdd1
IMS_HHH_1
HHH
PTCB-BRCT
BRCT
Helicase_C_4
Motif
Other DBs
NCBI-GeneID:
837592
NCBI-ProteinID:
NP_172522
TAIR:
AT1G10520
UniProt:
Q9FNY4
A0A654E9R3
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All DBs
Position
1:3465926..3469455
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AA seq
529 aa
AA seq
DB search
MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT
HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKIDSEEVDKPK
KSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSPDSPTSCSVPSTSASPGEGI
AETPTSPQSESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTR
IESVDQLKHLPGIGKAMRDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGPATAL
KLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEETLPGV
NIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFSTHSEEG
TDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAESKGYR
LDDTGLFPATHSSSGNRGARGTASLKLSTEKQVFDFLGFPWLEPHERNL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaagcgagggagaaaccggtcgccgtctccggacccggaagggatgttcgcc
ggaatggtagttttcatggttgaaatcggagtccagcgtcgtcgattgcagatctggaag
cagaagctggttcaaatgggtgcagtgatcgaagaagatcgggtaacgaagaaagtcact
catgttcttgccatgaatctcgaagctcttctccacaaatttgggaaagaacgtctctcg
cattttacagcacgccttatgctttaccagtggttagaagatagcctaacttcaggagag
aaggctaatgaagatttgtatgttctcaaaattgactcagaagaagttgataagccgaaa
aagtctttgcctgcaataagtggtagcgaggatcaatcttcacctcaaaaaagaaccaga
tattctcctgatgctggtgacttcaaaggcgttgaaagtcatagcaatacacaaggatca
ccggattcaccaacaagttgcagtgttccctctactagcgccagtcctggagaaggcatc
gcagagactcccactagtccacaatcagagtccacatcggtgtacaaaccacccgatttg
aacagaaatatcactgagatatttggaaagttaattaacatatatagagctttgggtgaa
gatagacggtcctttagctattacaaagctatccccgtcattgaaaagttccccactagg
attgaaagcgttgatcagctcaaacacctccctggaatcggaaaggcaatgagagatcat
attcaagagattgtgacaacagggaagttgtccaagcttgaacattttgaaacagatgag
aaggttcgtacaatcagtttgttcggggaagtttggggtgtcggtcctgcaactgcactc
aagctatatgagaaaggacatcgcacactagaagacttgaagaatgaggattcactaacg
catgcacagaagttggggttgaaatattttgatgatatcaaaacacgaattccacgtcag
gaggtgcaagagatggaacaacttttacagagagtcggcgaggaaactttgcctggcgtg
aatattgtatgtggaggatcatatagacgtgggaaagctacttgtggagatctggatatc
gttgtcacccatcctgatggacaaagtcacaagggatttttgacaaagtttgtaaagcgt
ttaaaagaaatgaactttttaagggaggatctcatcttcagcacccacagtgaagagggt
actgattcaggcgttgacacgtattttggtttgtgcacttatcctggtcaggagctacgg
cgccgtatcgattttaaggtctatccaagggatatctattcgtttggactcatagcctgg
acagggaacgacgtgttgaacagaaggctgagattgctagcagaatcgaaaggatatcga
cttgacgacactggactattcccagctactcacagttctagtggtaaccggggtgctaga
ggaactgcaagtctgaaactctcaacggagaaacaagtttttgatttcttaggatttcct
tggctcgagccacacgagaggaatctctaa
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