Arabidopsis thaliana (thale cress): AT1G11160
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Entry
AT1G11160 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ath04812
]
AT1G11160
Cytoskeleton proteins [BR:
ath04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
AT1G11160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
eIF2A
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IP5PC_F
Ge1_WD40
VPS8_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
837657
NCBI-ProteinID:
NP_001323134
TAIR:
AT1G11160
UniProt:
A0A1P8AW69
LinkDB
All DBs
Position
1:3733044..3739844
Genome browser
AA seq
1019 aa
AA seq
DB search
MAKRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSP
VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS
DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF
KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQT
LFCGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISEL
EPYGAVSEDKNECMVKRFSVLNDQSERMGSGPRGSVSPDYETREIKNIYVDCGNLNVAQN
PGSLKATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSRDSDSGEESSYSERESIPFSR
TKSGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNASKPF
DAEDSIIKGITNKFEKALSSEPPTDEANRMFLKPPRIHRSSNSKYNDTRRAMSADPATFG
KGGMENSGDVEDIPSKTERVLSREKPGDEQKNTEYPSGSRELNPVKIVEGVNVVSGRTRS
LVEKFERGEKTTHTEGASTTIEQNNNAVQEDPRKTSRQTGETPVISTRRARSTPARVMPI
VLNRDSNVTSDEPPLTQPARTSSFPVMPVILNQASNVTYDEPSVALTQESRTSHARILPV
TFNQATNITSEEASVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRPLRTSPARVMPTK
LNQSVNMTSDTSHIASMHRVSPTQMLATPTVIDQVADMTLDETHATQIQPACDNMPQKEE
PNISDREDDSDITENLMLTHNEFLSTLQSRLTKLQIVRHFWERSDVKGAIGALRKLTDQS
VQADVISILTEKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRS
TVSAPRIVGVDLHANERLEICQICSAGLHKIQRILPVLARRGGLITRKAQELNLVLQEP
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtggatataagctacaggagtttgtggcacattctggaaatgtgaattgt
ctaagtatcggaaagaagacgtcacggctccttctaacaggtggagatgattataaggtc
aacctttggtcaatcggcaaaaccacttctccaatgagtctttgtgggcatacaagcccg
gttgattcagtagcttttaactcagaagaagttttggtactcgctggggcttcttcaggt
gtgataaagctgtgggatctagaagaatcaaagatggttcgagcttttactggacacaga
tccaattgttctgctgttgagtttcatccatttggtgaatttcttgcatcgggatctagt
gacaccaatctaagggtttgggataccagaaagaagggatgcatccaaacatacaagggt
catactcgcggcatcagcactattgaatttagccctgatggtcgttgggtagtgtctgga
ggacttgacaacgttgtaaaggtatgggatttgactgctggaaagctattgcatgagttt
aagtgtcatgaaggacctattcgctccctagacttccatccgctggagtttctcttagcc
actggttctgctgacaggactgtgaaattctgggatttggaaacgtttgaactgattgga
actactagaccagaggctactggagttcgtgcaatcgcttttcatccagatggtcaaacc
cttttctgtggattggatgatggcttgaaggtttattcatgggaaccagtgatttgccgg
gacggtgttgatatgggatggtcaacacttggtgacttctgcatcaacgaaggaaagttt
attggttgctcatattaccgaaattctgttgggatatgggtttcagatatatcggaactt
gagccatatggagcagtatctgaggataagaatgaatgcatggtgaaaagatttagtgtc
ttgaatgatcagtctgagagaatgggaagtggcccaaggggcagcgtatccccagattat
gagacaagagagataaagaacatatacgtcgactgtggaaatttgaatgtagcgcaaaat
ccaggatctctgaaagcgacattgcctttggaatcaggaaaagtagctactatggtgagc
gagaagcagaatgcagcatattttggaccagcaggagacaagtattctagtacatcgcgg
gatagtgatagtggagaggaatcttcttattcagaaagggaatctatccctttctcaaga
acgaaatcgggcatgttgctaagaccagcacatgtaagaaagacgctagcaaagtttgaa
gaatcaaaacagtcagcggttgttcaatctgcaactcgaaagaaaagcggattggctgtt
gaggaggaaccacaaactcaaaacgcgtttctttcagaacagaatgctagtaaacctttt
gatgctgaagattctatcatcaagggtattactaacaagtttgaaaaagctttatcatcg
gaaccaccaactgatgaagcgaatcgtatgttccttaaaccacctcgtatccataggtca
tcaaatagcaagtacaatgacacaagacgagcaatgtctgctgatccggcaacttttggc
aaaggtgggatggagaactcaggagacgtagaggatattcccagcaaaactgaaagagtt
ctttcacgagaaaaacctggcgatgaacagaaaaacactgagtaccctagcggcagcaga
gaattgaaccctgtgaagattgttgaaggagtaaatgttgtctcggggaggacacgctcc
ttagttgagaagtttgagagaggagaaaaaactactcatactgaaggagccagtacaaca
atagaacagaacaataatgcagtgcaggaagatccgcgtaagacatcaagacagacaggt
gaaactcctgtcatatcaacacgacgagctaggagtactccagccagagtgatgcctatt
gttctcaatcgggatagtaacgtgacatctgatgagcctcctttaacacaaccagctagg
acttcttcatttccagtgatgcctgtgatactcaatcaagcttctaatgtcacatatgat
gagccttctgtagcgttaacacaagaatctagaacttctcatgcccgtatattgcctgtg
acattcaatcaggcgacaaatattacatctgaggaggcttctgtaacattaaggcgccaa
cgcaggaattctgcagcacgagtaaggcctgtgttactcagtcaggcaacatctcatgag
tgtcctgtaacatcagtacgtccattaaggacttctccagcccgtgtaatgcccacgaaa
ctaaatcaatctgttaacatgacatctgatacatctcatatagcatccatgcaccgagtt
agtccaacacaaatgttggctacacccactgtgattgatcaagtggctgatatgacattg
gatgagacacatgcaacacaaattcaaccagcttgcgataacatgcctcagaaggaagag
ccgaatatatctgatagggaagatgatagtgacataactgaaaatcttatgctaacccat
aacgagttcttaagcactcttcaatcgaggttgacaaagttacaaattgtaagacatttt
tgggagcgtagcgatgttaaaggcgcaattggggcattaagaaaactgacagatcagtct
gttcaagcagatgtgatcagtattctaactgaaaaaatagaaattctcacattggatatg
ttttctcaattggtccctgtcctcacaagcttattgggtagcaggacagagaggccggta
aatgtctccttggatatgctcttgaagcttgtagcagtgttcggtacagttatacgctca
actgtttcagctccacggattgtcggcgttgatcttcatgcaaatgaaaggctagaaatt
tgccaaatttgttctgcgggactgcacaagattcaaagaattcttccagttctcgcaaga
agaggcggtctaataacaagaaaggctcaagaactaaacctagttcttcaagaaccatag
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integrated database retrieval system
