Arabidopsis thaliana (thale cress): AT1G12400
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Entry
AT1G12400 CDS
T00041
Name
(RefSeq) Nucleotide excision repair, TFIIH, subunit TTDA
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03022
Basal transcription factors
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AT1G12400
09124 Replication and repair
03420 Nucleotide excision repair
AT1G12400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT1G12400
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G12400
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AT1G12400
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AT1G12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
837795
NCBI-ProteinID:
NP_001321468
TAIR:
AT1G12400
UniProt:
Q6NNM0
A0A178WKZ4
LinkDB
All DBs
Position
1:4221779..4222875
Genome browser
AA seq
71 aa
AA seq
DB search
MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF
RDQNSYEKPTS
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcaatcaaaggagtgttcgtctcttgcgatattccgatgacacaattcata
gtgaacatgaacaattcgatgcctccgtctcagaaattcataattcatgtacttgatagt
actcacttgttcgtgcaaccacatgtagagcagatgatccgcagcgccatttctgatttt
agagatcaaaactcttacgagaagcccacttcttag
DBGET
integrated database retrieval system
