Arabidopsis thaliana (thale cress): AT1G13220
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Entry
AT1G13220 CDS
T00041
Symbol
LINC2
Name
(RefSeq) nuclear matrix constituent protein-like protein
KO
K27866
protein CROWDED NUCLEI
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G13220 (LINC2)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
AT1G13220 (LINC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRWN_N
CRWN_second_CC
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
837882
NCBI-ProteinID:
NP_563924
TAIR:
AT1G13220
UniProt:
Q9SAF6
LinkDB
All DBs
Position
1:4515464..4520306
Genome browser
AA seq
1128 aa
AA seq
DB search
MTPRSETHKIGGVTNPRNADRKGKAVAFSDDLVIPTLPPPPIGTLTGQGVSRGHTDDMDM
GDWRRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQL
NQAFQEAQEILKREQSSHLYALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKI
RLSSEAKLVEANALVASVNGRSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVL
QQERLSFTKERESYEGTFQKQREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKL
KLKEKELEEWNRKVDLSMSKSKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFE
EKLIAREGTEIQKLIDDQKEVLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVEIDH
SEEKLEKRNQAMNKKFDRVNEKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQLLSDKES
LEDLQQEIEKIRAEMTKKEEMIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFL
SKEVENLKQEKERFEKEWEILDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESAL
RVQIMQELDDIRLQRESFEANMEHERSALQEKVKLEQSKVIDDLEMMRRNLEIELQERKE
QDEKDLLDRMAQFEDKRMAELSDINHQKQALNREMEEMMSKRSALQKESEEIAKHKDKLK
EQQVEMHNDISELSTLSINLKKRREVFGRERSRFLAFVQKLKDCGSCGQLVNDFVLSDLQ
LPSNDEVAILPPIGVLNDLPGSSNASDSCNIKKSLDGDASGSGGSRRPSMSILQKCTSII
FSPSKRVEHGIDTGKPEQRLSSSVAVGMETKGEKPLPVDLRLRPSSSSIPEEDEEYTDSR
VQETSEGSQLSEFQSSRRGRGRPRKAKPALNPTSSVKHASLEESSKDELSGHVSVTSKKT
TGGGGRKRQHIDDTATGGKRRRQQTVAVLPQTPGQRHYNLRRKKTVDQVPADVEDNAAAG
EDDADIAASAPSKDTVEETVVETLRARRIETNADVVSAENNGDVPVANVEPTVNEDTNED
GDEEEDEAQDDDNEENQDDDDDDDGDDDGSPRPGEGSIRKKLWTFLTT
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgagaagcgagacgcataaaatcggcggtgttactaaccctagaaacgctgat
agaaaaggaaaggcggttgctttcagtgatgacctagtaataccgactcttcctccgcct
ccgattggaacactgaccggacaaggcgtttctcgaggtcacactgatgatatggatatg
ggtgattggagaaggtttagggaagtgggtttgttgaatgaggcttcaatggagaagaaa
gatcaagaagctcttcttgaaaagatctctacacttgaaaaagagttatatggctatcag
cacaatatggggcttcttcttatggagaacaaagagttggtttcaaagcacgaacaacta
aatcaggcattccaagaagctcaagaaatccttaaaagggaacagtcatcacatctgtat
gcattgacgacggttgaacaacgtgaagaaaacttgaggaaagccttgggtctggaaaag
caatgtgtgcaagagcttgagaaggctcttcgtgaaattcaagaggagaatagcaagata
aggctgagttctgaagctaaattagttgaagcaaatgctctggttgctagtgtaaacggg
agatcttcagacgtggaaaacaagatttactctgccgaaagcaagctcgcagaggcaact
agaaagagctccgagctgaaattgagattgaaggaagtggagactcgtgaaagtgtcctg
caacaagaacggctttcatttactaaagagcgagaatcatatgaagggactttccaaaag
caaagagagtaccttaatgaatgggagaaaaagcttcaaggaaaggaagaatccataact
gagcagaagagaaacctgaatcaaagagaggaaaaggttaatgaaatagaaaagaagctg
aagctgaaagaaaaagaacttgaagaatggaatagaaaggttgatttgtctatgtcgaag
tctaaagaaactgaagaggacataactaaacgtttggaagaattgactacaaaagagaaa
gaagctcacacactccagatcacgctattggcaaaggagaatgagttacgagcatttgaa
gagaagctcattgctagagaagggacagaaattcagaagcttattgatgatcagaaagag
gtattaggttccaaaatgctggaatttgaactggaatgtgaagaaataagaaaatctctg
gacaaggaactccaaagaaagatagaagagctcgaacgacagaaagttgaaattgatcat
agcgaggagaagttggagaaaaggaatcaagcaatgaataagaagtttgaccgagtgaat
gaaaaggagatggaccttgaagcaaagttaaaaactattaaagaaagagaaaagatcata
caagctgaggagaaaaggttgagtttggaaaaacaacagttgctttctgataaggagagt
ctggaagacctacaacaagagattgaaaaaatccgagctgagatgaccaaaaaggaagaa
atgattgaagaagaatgcaaaagtcttgaaatcaagaaagaagagagggaagaatacctg
agactgcaatctgaactcaagtcccagatagagaaatctagagtccacgaggagtttctt
tctaaggaagtggaaaatctgaagcaagagaaagagagatttgaaaaggagtgggaaata
ttggatgagaagcaagcagtatacaataaagagcggataagaatatctgaagaaaaagaa
aagttcgagaggtttcaactactggaaggagaaagattgaagaaagaagagagtgctttg
agggtgcagataatgcaggaactggatgacattagactgcagagagaatcatttgaagcc
aatatggaacatgaacgatcagcgttacaggaaaaagtcaaacttgagcaatctaaggtg
attgacgatcttgaaatgatgagaaggaatcttgaaattgaacttcaggaaagaaaagaa
caagacgagaaagatctactagacagaatggctcagttcgaggacaaaagaatggcagag
cttagtgatatcaatcaccagaagcaggctttgaacagggagatggaagaaatgatgtcc
aaaaggagtgctctccaaaaggaaagtgaagaaattgcaaagcacaaggacaaactaaaa
gagcagcaagtagagatgcataatgacatcagtgaacttagtacactcagcatcaacctc
aagaaacgtagggaagtgtttggccgtgaaagatctcgttttctagcatttgttcaaaag
ctcaaggattgtgggagttgtgggcagctggtaaatgactttgtactctctgatctccag
ctaccatctaatgatgaagtagctattctaccacctattggagttttgaatgaccttcca
ggaagctctaatgcatctgactcttgtaatatcaagaaatctctagacggagatgcctct
ggaagtgggggatctagaaggcccagcatgtcgatactgcagaagtgcacttcaataatt
ttctcaccaagtaaaagagttgaacatgggattgacactggcaagcctgagcagcgtcta
tcctcctcagtggcagttggtatggaaacaaaaggtgaaaagcctctgccagttgatcta
cgtctgcgaccatctagtagctccattccggaggaggatgaggaatatacagacagtaga
gtacaagaaacatctgagggttctcagctatctgagtttcaaagttccaggcgtggacgt
ggcagacctagaaaagccaagcctgctttgaatcctacaagttcggtgaagcatgccagc
cttgaagaatcatcaaaagatgaattgagtggtcacgtttctgttactagtaagaagaca
acaggcggaggtggaaggaaaagacagcatattgatgatactgctactggtggaaagcgt
aggagacaacagacagttgctgtcttgccacagaccccaggccaaagacactacaatctg
agacggaagaagactgtagaccaagttccagcagatgttgaggataatgcagctgctggt
gaagatgatgcagacattgctgcctctgccccatcaaaggacactgtcgaagaaactgtg
gtggagactcttcgagctagaaggatagaaacaaatgcagatgttgtttctgctgagaac
aatggagatgtaccggttgcaaatgtggaaccaacagtaaatgaggatacgaacgaggat
ggagatgaagaagaagatgaagctcaagatgatgataatgaagaaaatcaagatgatgac
gatgatgatgatggggatgatgatggatcaccaagacccggtgaaggatccataagaaag
aagctttggacttttctcactacataa
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integrated database retrieval system
