Arabidopsis thaliana (thale cress): AT1G13980
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Entry
AT1G13980 CDS
T00041
Symbol
GN
Name
(RefSeq) sec7 domain-containing protein
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT1G13980 (GN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G13980 (GN)
Membrane trafficking [BR:
ath04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
AT1G13980 (GN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Mon2_C
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
837958
NCBI-ProteinID:
NP_172851
TAIR:
AT1G13980
UniProt:
Q42510
LinkDB
All DBs
Position
1:4788463..4794654
Genome browser
AA seq
1451 aa
AA seq
DB search
MGRLKLHSGIKAIEEEPEDFECTDSSNTTTLACMIDTEIAAVLAVMRRNVRWGGRYMSGD
DQLEHSLIQSLKALRKQVFSWNQPWHTISPMLYLQPFLDVIRSDETGAPITSIALSSVYK
ILNLNVIDQNTANIEDAMHLVVDSVTSCRFEVTDPASEEVVLMKILQVLLACMKNKASVM
LSNQHVCTVVNTCFRVVHQAGMKGELLQRVARHTMHELVRCIFSHLPDVERTETTLVNRA
GSIKQEKAGVDSDYAIVSKPVEDGNANSEYDVENSMATFATGAQSLMDDGPVGPGSRKPA
SPYDLHIMTEPYGVPSMVEIFHFLCSLLNVVEHVGMGSRSNTIAFDEDVPLFALNLINSA
IELGGSSIRHHPRLLSLIQDELFRNLMQFGLSMSPLILSMVCSIVLNLYQHLRTELKLQL
EAFFSCVILRLAQGKYGPSYQQQEVAMEALVNFCRQKSFMVEMYANLDCDITCSNVFEEL
SNLLSKSTFPVNCPLSAMHILALDGLIAVIQGMAERISNGLTGLDLGPVHLDEYTPFWMV
KCDNYSDPNHWVSFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVAC
FFRYTAGLDKNLVGDFLGNHDEFCVQVLNEFAGTFDFQYMNLDTALRLFLETFRLPGESQ
KIQRVLEAFSERYYMQSPEILANKDAALVLSYSIIMLNTDQHNVQVKKKMTEEDFIRNNR
HINGGNDLPREFLSELFHSICNNEIRTTPEQGAGFPEMTPSRWIDLMHKSKKTAPYILAD
SRAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTCIDGFLAIAKISACHHLEDVLDDL
VVSLCKFTTLLNPSSVDEPVLAFGDDAKARMATITIFTIANKYGDYIRTGWRNILDCILR
LHKLGLLPARVASDAADESEHSSEQGQGKPLANSLSSAHLQSMGTPRRSSGLMGRFSQLL
SLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRP
QKGTSSPEDEDTAVFCLELLIAITLNNRDRIVLLWQGVYEHIATIAQSTVMPCNLVDKAI
FGLLRICQRLLPYKESLADELLRSLQLVLKLDARVADAYCEQIAIEVSRLVKANANHIRS
QAGWRTITSLLSITARHPEASESGFDAVSFVMSEGTHLYPANYVLCVDAARQFAESRVGQ
SERSIRALDLMGDSLEFLAKWALSAKENMGEEDFGKMSQDIGEMWLRLVQGLRKVCLDQR
EDVRNHALQSLQKCLGGVDGINLAHSMWSQCFDKVIFTVLDDLLEIAAGSQKDYRNMEGT
LLLAIKLLSKVFLQQLQELSQLSTFCKLWLGVLTRMEKYMKVKVRGKKSDKLQESVPELL
KNILLVMKTKGVLLQRSALGGDSLWELTWLHVNNIAPSMRLELFPDQESSQLGDDETVSN
GLSSPENTTGS
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcctaaagttgcattctggaatcaaggccattgaggaagaacctgaggacttt
gagtgtactgattcaagtaatacaaccactttagcatgcatgattgatacggaaattgct
gctgttttagcggttatgagaagaaatgtaagatggggaggtcgatacatgtctggtgat
gatcaactagaacactcgttgattcagtcacttaaagctcttagaaaacaggtgttctca
tggaaccagccgtggcatacaattagtcccatgttgtatcttcagccctttcttgatgtg
atacggtcagatgaaactggagcaccaataaccagcattgctttgtcatcagtttacaag
atcttaaacctgaatgtaattgatcaaaatactgcgaatattgaagacgctatgcacttg
gtagttgattctgtgacaagctgtcgatttgaggtgacagatcctgcatcagaagaggtt
gtgctaatgaagatacttcaggttcttctagcatgtatgaaaaataaagcatcagttatg
ctaagcaatcagcatgtatgcactgtcgtcaacacttgttttcgtgttgtccaccaagca
ggaatgaaaggtgagttattgcaacgagtagctcgccacacgatgcatgaattagtgagg
tgtatcttctcgcatctcccagatgttgaaagaacagaaactacacttgtcaacagagct
ggtagcatcaaacaagagaaagctggagtagacagtgattatgccattgtgagtaaacca
gtcgaggatggaaatgctaattccgagtatgatgttgaaaattctatggcaacttttgca
actggtgctcaaagtttgatggatgatggaccagttggccctggaagcagaaagccggct
tctccatatgatttgcatataatgacagagccatacggagtcccaagtatggtggaaatt
tttcacttcttgtgctctttgttaaatgtggtcgaacatgttggtatgggatcccgatca
aacaccatagcatttgacgaagatgtgcctctgtttgcgttgaacttgatcaactcagcc
attgaattgggtggatcgtccatccgccatcacccaagattgttaagcctaattcaagat
gagttatttcgtaacttgatgcagttcggattgtcgatgagccccctgattctttcgatg
gtttgcagcattgtgctcaatttgtatcaacatctacgaactgaactcaagttgcagctt
gaggcattcttttcatgtgtgattctaaggcttgctcaaggaaaatatgggccctcgtat
cagcagcaagaggttgctatggaggctcttgtgaatttttgtaggcagaagagttttatg
gttgaaatgtatgccaatctcgattgtgatataacttgcagcaacgtgtttgaggagctg
tctaatcttctctcgaagagcacatttcctgtgaactgtcctttgtctgcaatgcacatt
cttgctctggatggcctaatcgctgttattcagggaatggccgagaggataagtaatgga
ttgactggtttggatttgggtcctgtccatcttgatgagtacacgcctttctggatggtt
aagtgtgacaactatagtgatccaaatcactgggtttcatttgtccgcaggagaaaatat
atcaagagaaggttaatgattggagcagatcattttaacagggatccaaagaaggggtta
gagtttctccaaggcacacatcttttgcctgacaaactcgatccccaaagtgttgcttgc
ttttttagatatactgctgggcttgataagaaccttgttggggattttcttggaaatcat
gacgaattttgtgttcaagttctcaatgagtttgctgggactttcgatttccagtacatg
aatctggatactgcactccgactcttcttggaaaccttcaggttgcctggagaatcccag
aaaatacagagagtgcttgaggcgttctctgaaagatactatatgcaatctcctgagatt
ctggccaacaaggatgctgctcttgtgttatcatactctattatcatgcttaacactgat
cagcacaacgttcaagtaaagaaaaagatgacagaagaggatttcattcgcaataatagg
catatcaatggaggaaatgatctacctcgagaattcttgtctgaactctttcactccatc
tgcaacaatgagatcaggactactccagaacaaggtgcaggctttcctgaaatgactccc
agccgttggattgatttgatgcataaatcaaagaaaactgctccatatattctggctgat
tcaagggcttatcttgaccatgatatgtttgctatcatgtctggtccaaccattgctgcc
atatcagtcgtttttgaccatgcagaacatgaagacgtttaccagacatgcatcgatgga
ttcttggctatagctaaaatttctgcctgtcatcatcttgaagatgtgcttgatgatctg
gttgtctctctctgcaaattcacaactctgttgaatccatcatctgttgatgaacccgtt
cttgcatttggtgatgacgcaaaagcaaggatggctactatcacaatttttaccattgca
aacaaatatggagattatatacgtacgggttggaggaacatattggactgtatcttacgg
ctacataaacttggacttctgccagctcgtgtagccagtgatgcagctgatgaatcagaa
cattcatctgagcaagggcaaggaaagcccctcgcgaattccctatcttcagctcatcta
cagtcaatgggaactccgaggagatcttccggattgatgggaagatttagtcagcttctt
tcacttgatacagaagagccaagatcacagcctactgagcaacagcttgcagctcatcaa
cgaacacttcaaacaattcagaaatgtcacattgacagcatatttaccgaaagcaagttt
ctacaagctgaatctttgttgcagcttgcgcgtgctctcatttgggctgcaggtaggcca
cagaaaggaaccagttctccagaggatgaggatactgcggttttctgtctggaattgctt
attgcaatcactctaaacaacagagacaggatcgttctcctatggcaaggcgtctatgaa
catatagctacaattgctcagtcaacggtgatgccctgcaacttagtggataaagctatt
tttggtctacttcggatctgccagagactacttccttataaagaaagcctagctgatgag
cttttgagatctcttcagcttgtgctgaaactggatgcacgtgttgcagatgcctattgt
gagcaaattgcaattgaagtcagccgtcttgtgaaagccaatgctaatcacatcaggtct
caggcgggttggagaacaatcacatccttactctccatcacagcgcggcacccagaagct
tctgaatcaggatttgatgccgtatcctttgttatgtctgaaggaactcacctgtatcca
gccaattatgtactctgtgttgatgctgcaagacagtttgctgaatcccgcgtgggacag
tccgaacgctctatccgtgcccttgatctaatgggagattcattagaatttttggctaaa
tgggctctctcagctaaggaaaacatgggagaagaagatttcgggaagatgtcacaagat
attggggaaatgtggttaaggcttgttcaaggactaagaaaagtgtgtttagaccagagg
gaggatgtccgaaaccacgctttacagtcattacagaagtgtttaggcggagtagacgga
atcaacctagctcatagcatgtggtctcaatgctttgacaaagtaatcttcacggttttg
gatgacttacttgagatagctgctgggtcacagaaagactaccgaaacatggaaggcaca
ttgcttctcgcaatcaaacttctctccaaagtgtttcttcagcaactccaagagctatct
cagttatcaaccttctgcaagctatggctcggtgttctaactcgaatggagaaatacatg
aaagtgaaagtaagaggcaaaaaaagcgacaagctacaagaatcagtaccagagcttctc
aaaaacatattgctggtgatgaagacgaaaggcgtgctattgcaaagaagtgctcttggt
ggagatagcttatgggagctaacatggcttcatgtgaataacattgcaccgtctatgcga
ctggagctattccctgatcaagaatcctcacaacttggtgatgatgaaaccgtatcgaat
ggcttatcttctcctgaaaacacaactggttcgtga
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integrated database retrieval system
