Arabidopsis thaliana (thale cress): AT1G15200
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Entry
AT1G15200 CDS
T00041
Name
(RefSeq) protein-protein interaction regulator family protein
KO
K13114
pinin
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G15200
03015 mRNA surveillance pathway
AT1G15200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G15200
03041 Spliceosome [BR:
ath03041
]
AT1G15200
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AT1G15200
Spliceosome [BR:
ath03041
]
Complex C
Other components
EJC/TREX
AT1G15200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
838086
NCBI-ProteinID:
NP_001184999
TAIR:
AT1G15200
UniProt:
F4HZI6
LinkDB
All DBs
Position
1:complement(5228300..5231184)
Genome browser
AA seq
428 aa
AA seq
DB search
MGDTALEKTAEELRHEIDELHRQQREITERLRDPRGLRRGGFSNVAPRNQGRRGFPRPAE
RNDVEDEPPAKRRLSSAVVKVDGEDVSKDGEFPVDGNGTQVKVGENGTSDQSDKKQSGLH
RGSWSQRDAEQRRTNKRYEAFALPEPAPRVLPKNEDPKLVNRNRRMLGNLLGTLEKFRKE
DKQRSGTDAYARRTAALQRAEEKAREESERLRLQERENLTEKRRRDLTLRARVAAKAEQK
KLELLFLQWSEHQKKLSNFIRLLTAMTKAEPRIYYAPVKPLEEDTSEVEQQKERTFLEWK
AARRQEVSEYQKEIEEQCLGNVEKELERWQNARKARKANNEGMNLQETMDKELETHRMEH
GPKKRKIPGGGVGDEDEEDEVEDINGGEDEMIMDDLLEEGGDGTIKEEVATDTVKAEAVE
EDIKHEVL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaccgccttggagaagacagcggaagagctacggcatgagatcgatgagctt
caccgtcaacagcgtgagattacggagaggcttcgtgaccctcgtggactccgccgtgga
ggcttctcaaacgtcgctcctcgcaaccaaggccgtagaggctttcctcgacctgcggag
aggaatgacgtagaagacgagcctcctgctaaaaggagattgtcttccgccgttgttaag
gtcgacggtgaagatgttagtaaagatggagaatttccagttgatggtaatggaacccag
gttaaagttggtgagaatgggacttctgatcaaagtgacaagaagcaatctggtcttcat
cgtggaagttggtcccagagagatgcagaacaacgacggaccaataagcgttacgaagct
tttgcattgccggagcctgcaccaagggttttacctaagaatgaggatcctaaactggtt
aataggaacagaagaatgctagggaatcttctagggactttggagaagttcagaaaagaa
gataagcagcgttctggaacagatgcatacgcccgacgaactgcagctctacaaagggcg
gaggaaaaggctcgtgaagaaagtgaacgactgaggctgcaggagcgtgaaaatttgact
gaaaagaggagaagagatcttactcttcgggctcgtgttgctgctaaagcagaacaaaag
aaattggaattgcttttccttcaatggagtgagcaccaaaagaaacttagcaattttata
agattgctaactgctatgactaaagcagagccacggatatactatgcaccagtgaagcct
ttggaagaagatacaagtgaggtagaacaacagaaagagcggacattcttagaatggaag
gcagcaaggagacaagaagtgagtgagtatcaaaaggagatagaagagcagtgtctgggt
aatgttgagaaagagctggagaggtggcaaaacgcaaggaaggcaaggaaagcaaacaac
gagggtatgaatttgcaggaaacgatggacaaggaattagagactcataggatggagcat
gggccaaagaagagaaagatacctggaggaggagtaggagatgaagatgaagaagatgaa
gtagaggatatcaatggtggagaggatgaaatgataatggatgatttactggaggaggga
ggagatggaaccatcaaggaggaagtggcaactgatacagttaaagcagaagcagtggag
gaagatattaaacatgaggttctctaa
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