Arabidopsis thaliana (thale cress): AT1G17440
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Entry
AT1G17440 CDS
T00041
Symbol
EER4
Name
(RefSeq) Transcription initiation factor TFIID subunit A
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AT1G17440 (EER4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT1G17440 (EER4)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G17440 (EER4)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
AT1G17440 (EER4)
Coactivators
SAGA/TFTC/STAGA complex
AT1G17440 (EER4)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
AT1G17440 (EER4)
STAGA complex
AT1G17440 (EER4)
TFTC complex
AT1G17440 (EER4)
SAGA complex
AT1G17440 (EER4)
SLIK complex
AT1G17440 (EER4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
838316
NCBI-ProteinID:
NP_564023
TAIR:
AT1G17440
UniProt:
Q940A7
A0A7G2DXG2
LinkDB
All DBs
Position
1:complement(5983984..5987934)
Genome browser
AA seq
683 aa
AA seq
DB search
MAEPIPSSSLSPKSLQSPNPMEPSPASSTPLPSSSSQQQQLMTAPISNSVNSAASPAMTV
TTTEGIVIQNNSQPNISSPNPTSSNPPIGAQIPSPSPLSHPSSSLDQQTQTQQLVQQTQQ
LPQQQQQIMQQISSSPIPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLSQ
IQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQNQQMVNPNMSRAGLVGQSGH
LPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPGSSGQQLQGMQAMGMMGSLNLT
SQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQA
GMMQNSLSQQQWLKQMSGITSPNSFRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMSLN
QQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQ
QQPSPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQV
DVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPG
FSSEDKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRP
SQSSEQLVSQTSGPHILQHMTRY
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccgattccctcatcgtctctgtcaccgaaatctctacaatctcctaatcct
atggaaccttctcctgcatcttctactcctttaccttcatcatcatctcaacaacaacaa
ctcatgacagctccgatttccaattctgttaattccgctgcgtctccggcgatgactgta
actaccaccgaaggtattgtaattcagaacaattcgcaacctaacatctcctctcccaac
cctacttcttctaacccaccaatcggagctcagatcccgtcgccttctcctctctctcac
ccttcttcatctttagatcagcaaacacagactcagcaactcgttcaacaaactcagcaa
ttgcctcaacaacaacaacagattatgcagcaaatctcttcatctccgattccacaatta
tcgccgcaacagcaacagattctgcagcaacaacacatgacttcacagcaaatcccaatg
tcgagttaccaaattgctcaatctcttcagcgatccccttctctttctcgcctgagccaa
attcagcaacaacagcagcagcagcatcaaggtcaatacggcaacgtgttgagacagcaa
gctggtttgtacggaaccatgaactttggtggctcaggttcagttcaacagagccagcag
aatcagcagatggttaaccctaatatgtccagagcaggtttagttggccaaagcggtcac
ttgcctatgcttaacggtgctgctggagctgctcagatgaatattcaaccccaattattg
gctgcttcgccgaggcagaaatctggcatggttcaaggttcgcagtttcatccgggaagt
tctggacaacagttacaagggatgcaagctatgggaatgatgggatcactgaatttgacc
tcgcaaatgagaggtaaccctgctctctatgcgcagcagagaatcaacccggggcagatg
agacagcaattgtcacagcaaaacgctcttacttcacctcaggtccagaacctccagaga
acatcttctctcgcatttatgaatcctcagctatcgggtttggcccagaatggacaagct
ggcatgatgcaaaactctttgtcacagcagcaatggctgaagcaaatgtcgggaataacg
agccccaattcattccgactccaaccgagtcaaagacaggctcttctcttacagcagcag
cagcagcaacaacaacaactgtcctctcctcagttacatcaatcttctatgtccttgaat
cagcagcagatatcacagataatacaacagcagcagcaacaatcacaattaggccagtcg
cagatgaaccaatcccattcccaacaacaactacaacagatgcagcagcaactacagcag
caaccacaacagcagatgcagcagcagcagcaacaacaacagcaaatgcagattaatcaa
caacagccatctccaaggatgttgagtcatgcaggacaaaaatctgtcagtttaacgggt
tcacaaccagaggctacacaatcgggtacaacaacaccaggtggtagctcaagccaggga
acagaagcaacaaaccaactccttggtaaaaggaagatacaggatctggtttcgcaggtg
gatgtacatgcgaaactggatcctgatgttgaagacctccttttggaggtggcagatgac
ttcattgattcggtcacatcttttgcatgtagcttggctaagcatcgtaaatcatctgta
ttggagcccaaggatatattactccacctagagaaaaacttgcacttgacaattcctgga
ttctcaagtgaggataaacgtcaaacaaaaactgtaccaactgatctccacaagaagcga
cttgcaatggtgcgtgcattactagaatcctcaaaaccagagacgaatgcaagcaattcc
aaggaaactatgagacaagcgatggtgaacccaaatggtccgaatcatctcttaagaccc
tcccaaagttcagaacaattggtttcgcagacatccggtcctcacatattacaacacatg
acacgatactaa
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integrated database retrieval system
