Arabidopsis thaliana (thale cress): AT1G17760
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Entry
AT1G17760 CDS
T00041
Symbol
CSTF77
Name
(RefSeq) Tetratricopeptide repeat (TPR)-like superfamily protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT1G17760 (CSTF77)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G17760 (CSTF77)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
AT1G17760 (CSTF77)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_2
NRDE-2
TPR_CcmH_CycH
Iml2-TPR_39
TPR_8
TPR_16
A-2_8-polyST
Motif
Other DBs
NCBI-GeneID:
838354
NCBI-ProteinID:
NP_173218
TAIR:
AT1G17760
UniProt:
Q8GUP1
A0A5S9UZE4
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All DBs
Position
1:complement(6110107..6116617)
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AA seq
734 aa
AA seq
DB search
MADKYIVEEAEALAKRALHSPIAQATPIYEQLLSLYPTSARFWKQYVEAQMAVNNDDATK
QIFSRCLLTCLQVPLWQCYIRFIRKVYDKKGAEGQEETTKAFEFMLNYIGTDIASGPIWT
EYIAFLKSLPALNLNEDLHRKTALRKVYHRAILTPTHHVEQLWKDYENFENTVNRQLAKG
LVNEYQPKFNSARAVYRERKKYIEEIDWNMLAVPPTGTSKEETQWVAWKKFLSFEKGNPQ
RIDTASSTKRIIYAYEQCLMCLYHYPDVWYDYAEWHVKSGSTDAAIKVFQRALKAIPDSE
MLKYAFAEMEESRGAIQSAKKLYENILGASTNSLAHIQYLRFLRRAEGVEAARKYFLDAR
KSPSCTYHVYIAFATMAFCIDKEPKVAHNIFEEGLKLYMSEPVYILKYADFLTRLNDDRN
IRALFERALSTLPVEDSAEVWKRFIQFEQTYGDLASILKVEQRMKEALSGKGEEGSSPPE
SSLQDVVSRYSYMDLWPCTSNDLDHLARQELLVKNLNKKAGKTNLPHVPAAIGSVASSSK
VVYPDTSQMVVQDPTKKSEFASSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPP
ALVAFLANLPIVDGPTPNVDVVLSICLQSDFPTGQTVKQSFAAKGNPPSQNDPSGPTRGV
SQRLPRDRRATKRKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQTPTGSTS
YGSAFSGELSGSTG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagtacatcgtcgaggaagcagaggctttggccaagagagctttgcattca
ccaattgcacaggcgacgccgatctacgagcagcttttgtcactttatcccacttctgcg
agattttggaagcaatatgtggaggcacagatggctgtaaacaatgatgatgctaccaaa
cagatatttagtcgttgtttgttgacctgccttcaagttcctctttggcaatgttacatt
cggttcatcagaaaggtctacgacaagaagggagcagagggtcaagaggagaccacaaag
gcttttgagtttatgcttaactatattgggacagacatcgcatcagggcctatatggact
gagtacattgcctttctaaaatctcttccggctcttaacctcaacgaagatttgcatcgg
aagactgctcttcgaaaagtgtatcatagagctatattaactccgacccaccacgttgaa
caactttggaaagattatgaaaacttcgaaaatactgttaaccgtcaattggcaaaagga
cttgtaaatgagtatcaaccaaaatttaacagtgccagggctgtatatagggagcgcaag
aagtacattgaagaaattgattggaacatgcttgctgtcccaccaacaggaacttccaag
gaagaaacccagtgggtggcctggaaaaagttcttgtcctttgaaaaaggaaaccctcaa
aggattgacacggcctcgtcaactaagcggattatatatgcctatgaacagtgtctgatg
tgtttatatcactatcccgatgtatggtatgactatgctgagtggcacgtaaaatctggt
tccacggatgctgcaatcaaagtatttcagcgagctcttaaagccattcctgattcagag
atgttgaaatatgcttttgctgagatggaggaatctcgtggagcaattcagtcagcgaag
aaattatatgaaaacattttgggggctagcacaaactctttggcacatatacaatacctt
cgttttctccggagggctgagggtgttgaagctgctcgcaagtactttttagatgctaga
aaatctcctagctgcacatatcatgtgtatattgcttttgctaccatggccttttgtatt
gacaaggaaccaaaggttgcacataatatctttgaagaggggttgaaactctatatgagt
gaacctgtttacatccttaagtatgcagatttcttgactagattgaatgatgatagaaat
atcagagctctatttgagcgggcattaagcacgttaccagttgaagactctgctgaggtc
tggaaaagattcattcagtttgagcaaacatatggagatcttgctagtattctaaaggtt
gagcagagaatgaaagaagcactttctggaaaaggggaagaggggtcttctcctccagag
agttcacttcaagatgttgtttctcggtacagttacatggatctttggccatgcacttct
aacgaccttgatcatttagccagacaagagttgcttgtgaagaatctgaataagaaagca
gggaaaacaaatctacctcatgttcctgcggctataggtagtgtagcttcttcgtcaaaa
gttgtttatccagatacatctcagatggttgttcaagacccgacaaagaaatcagagttt
gctagttctgcaaacccagtggcagcttctgcttcgaacaccttcccaagtactgtgact
gcaactgcaactcatggatcagccagcacatttgacgaaataccaaagactactccacct
gcattggtagcatttttagctaacttgcctattgtggacggtccaacacccaatgtggat
gttgttctgtcgatatgtttgcagagcgactttccaacaggtcaaactgtaaagcagagt
tttgctgctaaaggcaatcctccaagtcaaaacgatccctcgggtccaacccgcggtgtg
tctcaaagattaccaagagacagaagagctacaaagagaaaagattcagacaggcaagaa
gaagatgatacagcaactgtacaaagccagcctttgcccacagatgttttcagactaagg
cagatgcggaaagctcgagggatcgcaacatcatcacagacaccaaccggttccacatcg
tatggtagtgccttctctggcgagctttctggtagcactggctaa
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