KEGG   Arabidopsis thaliana (thale cress): AT1G18830
Entry
AT1G18830         CDS       T00041                                 
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
  KO
K14005  protein transport protein SEC31
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT1G18830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G18830
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ath02044]
    AT1G18830
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    AT1G18830
Secretion system [BR:ath02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   AT1G18830
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd TPR_Sec16 WDR55 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_HPS5 TPR_GEMI5 EIF3I Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_SCAP Prp18 SRA1 MIOS_WD40
Other DBs
NCBI-GeneID: 838464
NCBI-ProteinID: NP_173317
TAIR: AT1G18830
UniProt: F4ICD9
LinkDB
Position
1:6489233..6494634
AA seq 969 aa
MDCIKSIGRSAFVAIAPESPFIAAGTMAGAVDLSFSSSANLEIFELDFQSNDRELKLVGQ
CQSSERFNRLAWGSYGSGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRG
LEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLA
STSHNGTTVIWDVNNEKIITDLKTTVRCSVLQWDPDHFNQILVASDEDSSPNVKLLDIRY
LQSPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFD
VHWYPKMPGVISASSVDGKIGIYNLEGCSSYGTENQQHFLFHLLDADPLTAPKWWKRPAG
ASFGFGGKLISFNKNLPEASEVFLHSLATEKSLVNRISKFEAALENGEKTSLRGLCEKKT
EEAESEEEKETWGLLKIMLEEDGNAKTKLRSHLGFSLPSEENDQTANEPHATCSSTNVEE
TQKVPEPEGEEEESSDPTFDDAIQRSLIVGDYKEAVAQCFSANKMADALVIAHVGGTELW
ESTRDKYIRMSNAPYMKVVSAMMNNDLMTYLHTRQPKSWKETLALICTFAEGDEWISLCD
ALASNLMAAGFTLAATLCYICAGNVDKTVDIWSMSLEKQSAGKSYAECVQDLMEKTLVLA
LTTCNKRVSASLRKLFESYAEILASQGLIATAMKFLKLLESGDFSPELSILRDRISLYAE
PEAANTSASTNTQPKISNPYQEKSFTPAPLSNAQPSRSITFFPLNPPRELKNADQYQQPT
MDYHSFNRSAGPAYNAPPGPGSYRSIHSQVGPYINSKIPQTVAPPVRPMTPTHQVAVQPE
PVAPPPTVQTADTSNVPAHQKPIVASLTRLFKETFEPLRGYSRDTPAKKREAEDNCSRKL
GALFSKLNNGDISKNAAEKLTQLCQALDKRDFGAALKIQGLMTSTEWDECSSWLPTLKKM
IVTGRQNVR
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggattgcataaagagtattggtagatccgctttcgttgccatcgcgccggaatctccg
ttcatagcagccggaacaatggccggagcagtagatctttcgtttagttcatccgccaat
ctcgagatctttgaactcgattttcagtccaacgatcgtgagctaaaactagtaggtcaa
tgccaaagttccgagcggtttaatcgactcgcttggggaagttatggctctggatccgat
ggtctcatagccggtggtctagttgacgggaacatcggtttatggaatccaattagttct
gagtctggtgaaattgcgcacgttagagatttgtcaaaacacaaaggacctgttcgtggt
cttgaatttaatgttaagtctccaaatcaacttgcttctggggctgatgatggtacagtt
tgtatttgggatttagcaaatccttcaaagccttctcattatctaaagggtactggttct
tatatgcaaagtgaaatctcttctttatcatggaataaagggtttcaacatgttttagca
tctacctcacacaacgggactacagtgatatgggatgtgaataacgagaagattataaca
gacttgaaaactaccgttaggtgctcagttttgcaatgggatcctgatcattttaatcag
attttggttgcttcagatgaagatagttcaccgaatgtgaagcttttggacataaggtat
ctacaatcacctgttcgcacatttgttggtcaccaaagaggtgtgattgcaatggagtgg
tgtccaagtgacagcttgtatctacttacctgtgggaaagacaaccgaactatttgttgg
aacacaaagacaggaaagattgtggctgagttacctactggtcaaaactggaattttgat
gttcattggtatccaaagatgcctggagttatatcagcatcttcagttgatgggaaaatt
ggcatctataaccttgagggttgtagcagctatggtaccgagaaccaacagcacttctta
ttccatcttctcgatgcagatcctttaacagcaccaaaatggtggaagcgcccggctggt
gcatcttttggatttggaggaaagcttatttcgtttaacaaaaatcttcctgaggcatct
gaggtctttctgcatagcttggccacagaaaaaagtttggtgaatcgaatttctaaattt
gaagctgcattagaaaatggagagaagacttcccttaggggtttatgcgagaagaaaaca
gaagaggccgaatctgaggaagagaaggaaacatggggactgctgaaaattatgcttgaa
gaagatgggaacgcaaagacgaagttgcgtagccatcttggctttagtttaccatctgag
gaaaatgatcaaactgctaatgagcctcatgctacatgttcttctacaaacgtggaagaa
actcagaaagtgccagaaccagaaggagaagaagaagagagctctgatccaacatttgat
gatgccatccaacgttcattgattgtgggagattacaaggaagcagtggctcagtgtttt
tctgcaaataagatggctgatgctttagttattgctcatgttggtggtacagaattgtgg
gagagtactcgtgataaatatataaggatgagcaatgctccttacatgaaggttgtttct
gcaatgatgaacaatgatctaatgacctaccttcatacaagacaacctaaatcctggaaa
gaaactcttgctctcatctgcacttttgcagaaggagatgaatggataagcctctgcgat
gctcttgcctcaaatttgatggctgctggttttactttggctgcaactctgtgttacatt
tgcgcaggcaatgtcgacaaaacagtagacatttggtcaatgagccttgaaaaacaaagt
gctgggaaatcttatgctgagtgtgttcaagatcttatggagaaaactcttgtccttgct
ttgacaacttgcaacaagagagtcagtgcgtctctacgtaaactctttgaaagttatgct
gagatattggctagtcaaggacttattgcaacagctatgaagttcttaaaacttctggag
tctggtgatttctcacctgaactttcaatcttgcgtgatcggatttctctgtatgcagaa
cctgaagctgctaacacttctgcttcaacaaacactcagcctaaaatttccaatccatat
caagagaaatcttttactccagctccattaagcaatgctcagccatcaagaagtattact
ttttttcctttgaatcctcctcgagaactaaagaacgcggaccaatatcagcaaccaacc
atggattatcattcatttaatcgatccgctggcccagcttacaatgctccacccggtcct
ggttcatatcgatccatccattcacaagttggtccatatataaactccaagattccccaa
actgttgctcctccagtccgacctatgactccaacacaccaggtagcggtgcaaccagaa
cctgtagctccaccaccaactgttcagactgcagatacttccaatgtaccagcccaccag
aaacctattgtggcttcattgacaaggctatttaaagagacatttgaaccattaagaggt
tattcaagagatactcctgccaagaagcgtgaggcagaagataattgctcaagaaagcta
ggagctctgttttcaaaactaaataatggggacatctcgaagaacgctgctgaaaaactc
actcagctctgtcaagctctggacaaacgtgattttggtgcagcgttaaaaatacagggg
cttatgacaagcaccgaatgggatgagtgcagttcttggcttccaacacttaagaaaatg
atcgtcacgggaaggcaaaatgtgcggtga

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