KEGG   Arabidopsis thaliana (thale cress): AT1G20140
Entry
AT1G20140         CDS       T00041                                 
Symbol
SK4
Name
(RefSeq) SKP1-like 4
  KO
K03094  S-phase kinase-associated protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03083  Polycomb repressive complex
ath04120  Ubiquitin mediated proteolysis
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT1G20140 (SK4)
   04120 Ubiquitin mediated proteolysis
    AT1G20140 (SK4)
  09126 Chromosome
   03083 Polycomb repressive complex
    AT1G20140 (SK4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G20140 (SK4)
   04121 Ubiquitin system [BR:ath04121]
    AT1G20140 (SK4)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G20140 (SK4)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    AT1G20140 (SK4)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     AT1G20140 (SK4)
   Cul7 complex
     AT1G20140 (SK4)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     AT1G20140 (SK4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     AT1G20140 (SK4)
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 838604
NCBI-ProteinID: NP_564105
TAIR: AT1G20140
UniProt: Q9LNT9
LinkDB
Position
1:6986312..6987863
AA seq 163 aa
MAETKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEY
CKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLT
CKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE
NT seq 492 nt   +upstreamnt  +downstreamnt
atggcagaaacgaagaagatgatcatccttaagagctccgacggtgaatccttcgagatc
gaggaagccgtcgctgttaagtcccagacgattaagcacatgattgaggacgactgtgcc
gataacggaattccacttcccaatgtcaccggagccatcctcgccaaggttattgagtat
tgcaagaagcacgttgaagccgctgctgaagctggtggagacaaggatttctatggttcc
gctgagaacgacgagcttaagaattgggacagcgaattcgtcaaagtcgatcagcctact
ctcttcgatctcatcttggctgcgaactatttgaacatcggtggacttcttgaccttacg
tgcaaggccgtggctgatcagatgagaggcaaaactccagagcagatgcgtgcacacttc
aacatcaagaacgattacacacctgaggaagaggcggaggttcgcaatgagaacaagtgg
gcgttcgagtga

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