Arabidopsis thaliana (thale cress): AT1G20370
Help
Entry
AT1G20370 CDS
T00041
Name
(RefSeq) Pseudouridine synthase family protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT1G20370
Enzymes [BR:
ath01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AT1G20370
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT1G20370
Prokaryotic type
AT1G20370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
838625
NCBI-ProteinID:
NP_564112
TAIR:
AT1G20370
UniProt:
Q9LN29
A0A654EMB0
LinkDB
All DBs
Position
1:complement(7051577..7053745)
Genome browser
AA seq
549 aa
AA seq
DB search
MENQEPDIEKLPRDDVPDREPDHKKLKISTTGQETDSSAVTTGGSNVAERRAPKYRRRKV
AIVFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPDADRNKPRNYEWARSARTDKGV
SAVGQVVSGRFYVDPPGFVERLNSKLPDQIRVFGYKRVAPSFSSKKFCDRRRYVYLIPVF
ALDPCVHGEAEMVRTDLGYEYVKCVECSEKGYKIPLGVMGKDTDCCDTKSLEIQSDISSS
TCDAIGADVKCETLSSSVPSAENNLNSEVLDGADVSALSSKAEGMEESNTLAKVEMNNGE
GEDMTKSESKFCYGEKEKERFNRILSYYVGSHNFHNFTTRTKAADPAANRYILSFNANTV
INLDGKDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIEASFKKDVRINVPMAPE
VGLYLDECFFTSYNKRFKGSHEEVSMEEYKEVAEEFKWKYVYSHIGSAEEKDGAVAIWLH
SLNQRNYPDLRSNEYQPDEVIVYKKIGEASEENIHEGNAELFVVDKVNDETSEGTTMEER
TTLEEKATG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaagagcctgatatcgagaaattgcctcgagacgatgttcctgatagagaa
ccagaccataagaagctcaagatttcgaccaccggccaggaaactgattcctcggctgtt
accaccggcggaagcaatgtcgctgagcgtagagcgccgaaatacagacgccggaaagtc
gcaatcgtgtttgcgttctgcggagtagggtatcagggaatgcaaaagaatcccggcgcc
aaaaccattgaaggcgagctcgaagaggctttgttccatgccggagcagtacctgatgct
gatcggaacaaaccaagaaattacgaatgggcacgatccgctagaactgataaaggagtg
agtgcggtgggacaagtggtttctggtcgtttctatgttgatccgcctggatttgtggag
cggctcaattcgaagctccctgatcagattcgtgtgtttgggtacaagcgtgttgcaccg
tcgtttagctccaaaaaattctgtgatcggaggaggtatgtgtatctaatcccggttttt
gctttggatccatgcgtacatggtgaagctgagatggttagaacggatttaggttacgaa
tatgtcaaatgtgtagagtgctctgagaaaggctataagattccacttggtgttatgggt
aaagacactgattgttgtgatacaaaatcattggagattcagtcagacatttcgtcgagc
acctgtgatgcaataggagctgatgtcaagtgtgaaactttgagctctagtgtacctagt
gcagaaaataacttaaactcagaagttctagatggggctgatgtatctgctttaagctct
aaagcagagggtatggaagaatcgaatactttggctaaggtagagatgaacaatggggaa
ggagaagacatgactaaaagcgagagcaagttctgttatggagagaaggaaaaggagagg
tttaacagaatactaagctattatgttggttcacataacttccacaacttcaccaccaga
acgaaagcagcagacccagctgcgaatcgttacattctctctttcaatgcaaacacagtg
attaatctcgatggaaaagattttgtcaaatgtgaagttgttggacagagcttcatgctt
catcaaatccggaaaatgattggacttgctgttgctatcatgaggaactatgctcctgaa
tcactgatcgaagcttctttcaagaaggatgtgagaataaatgtaccgatggcgccagaa
gttggattataccttgatgaatgcttcttcacgtcttacaacaaaaggtttaaaggcagt
catgaggaggtgtcaatggaagagtacaaggaagtagctgaagagttcaaatggaagtat
gtttattcacatattggctctgctgaagaaaaagatggagctgtggcgatttggttgcat
tctctgaaccagagaaactatcctgatctacgaagcaatgaataccaaccggatgaagtc
attgtctataagaagattggtgaagcctctgaagaaaatatccatgaaggcaatgctgag
ctattcgttgtcgataaggtgaatgatgaaacctctgaaggaacgactatggaagagagg
accacactagaggagaaggcaacagggtga
DBGET
integrated database retrieval system
