Arabidopsis thaliana (thale cress): AT1G20500
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Entry
AT1G20500 CDS
T00041
Name
(RefSeq) AMP-dependent synthetase and ligase family protein
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00592
alpha-Linolenic acid metabolism
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
AT1G20500
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
838638
NCBI-ProteinID:
NP_173474
TAIR:
AT1G20500
UniProt:
P0C5B6
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Position
1:complement(7100502..7102915)
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AA seq
550 aa
AA seq
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MAYPERSLIVDPRSGFCKSNSTFYSKRQPLSLPPNLSRDVTTFISSQPHRGKTAFIDAAT
GQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAVFTTAN
TLNTSGEISKQIADSNPTLVFTTRQLAPKLPVAISVVLTDDEVYQELTSAIRVVGILSEM
VKKEPSGQRVRDRVNQDDTAMMLYSSGTTGPSKGVISSHRNLTAHVARFISDNLKRDDIF
ICTVPMFHTYGLLTFAMGTVALGSTVVILRRFQLHDMMDAVEKHRATALALAPPVLVAMI
NDADLIKAKYDLSSLKTVRCGGAPLSKEVTEGFLEKYPTVDILQGYALTESNGGGAFTNS
AEESRRYGTAGTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGYFKNQEATNETI
NLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLITHPDILDAAVIPF
PDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRK
DLIKLATSKL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctgagagatctctcattgttgatcctagaagtggtttctgcaaatcaaac
tctacattctatagcaagcgccaaccattaagtctcccgccaaatctttcgcgtgacgtc
accacattcatctcctctcagccacaccgtggcaaaaccgcctttatcgacgctgccaca
ggccagtgcttaaccttctccgatctctggagagccgtcgatcgcgtcgccgactgtcta
tatcatgaagtcggaatacgaagaggcgacgtcgtcctcatcctttctccaaactccatc
ttcattcccgttgtttgcctctccgtcatgtctctcggcgccgttttcaccaccgccaac
actctcaatacttccggtgaaatctccaaacagattgccgacagtaatccaactctcgtc
ttcactacgcgccagctggcaccaaaactccccgtcgctatctccgtcgttctcaccgac
gacgaagtttaccaggagctcactagcgcaatcagagtcgttgggattttaagcgagatg
gtgaagaaagaaccgagtgggcaacgagtcagggaccgagtcaaccaggacgacacggcg
atgatgctttactcgtcgggaaccacgggaccgagcaaaggagtgatctcgtctcaccgg
aatttaacagctcacgtggctagattcatatcggataatttgaaacgagacgatattttc
atctgtaccgtcccgatgttccacacctacggtttattgaccttcgctatgggcaccgta
gcattgggttcaacggtggtgatcctccggagatttcagctccacgatatgatggatgcg
gtggagaagcaccgagccacagctctggctttggcgccacctgttttggtagctatgatt
aacgacgcagatctgatcaaggctaagtacgatctgagctcactgaaaacggtgaggtgt
ggtggagcgccgttgagcaaggaggtgacggaagggtttctagagaaatatccgacggtt
gatatactgcaggggtatgctttgacggaatccaacggcggaggggctttcacgaattca
gcggaggagagccggagatatggcacggcggggacgttgacgtctgatgtggaggcgagg
atcgtggatccgaatacgggtcggttcatgggaattaaccaaacgggagagctctggctc
aagggcccttctatttctaaaggttattttaaaaaccaagaagctacaaatgaaaccatt
aatttagagggatggctaaaaactggagatctttgctacatcgatgaagatgggtttctt
tttgttgtggatcgattgaaagaactgataaaatacaaaggctatcaggtgcctccagct
gaactagaagctcttctgattactcatccggacattctcgatgccgccgttattcctttt
ccggacaaagaagcaggacaatatccaatggcttacgtggttcgaaaacacgagagcaat
ctctctgagaaacaagtcattgacttcatctctaagcaggtagcaccatataagaagata
agaaaggtctcatttataaactccataccaaaaactgcatccggtaagacgcttcgcaag
gatctaatcaaattggctacttctaaactttga
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