Arabidopsis thaliana (thale cress): AT1G20720
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Entry
AT1G20720 CDS
T00041
Name
(RefSeq) RAD3-like DNA-binding helicase protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT1G20720
03460 Fanconi anemia pathway
AT1G20720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G20720
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AT1G20720
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
AT1G20720
FA (Fanconi anemia) pathway
Downstream FA components
AT1G20720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
838662
NCBI-ProteinID:
NP_001322805
TAIR:
AT1G20720
UniProt:
A0A1P8AV25
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All DBs
Position
1:complement(7185288..7192841)
Genome browser
AA seq
1269 aa
AA seq
DB search
MVSSTSKSDSKEEVKQTLNSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQR
DGHCHALLESPTGTGKSLSLLCSVLAWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGF
IPETQPSDTPASTNVEKAETATKKRTKIPTIYYASRTHSQITQVIREYRKTGYRVPMAVL
ASRKHYCTNRHVLGKDNVDDECRLLLKDKANIQCSEFKNVNKITSHPSLQPRGHNEVHDI
EDLVKVGKNVRGCPYFASWSMAENAQLVFCPYSYIVNPVIRAGVEVDLKGAIIIFDEAHN
MEDIAREAGSINLEEDTLFKLQNELEQMSVAQPMIYQPLCEVVEGLISWIGRKKDSLAKR
DFQHYFSSWTGDKALRELEESNITRECFPILLECFTKAIRTSKEAEMESDMLYLSGISVL
TLEELFSSLTYFFSRNGSHILDYQLGLQRSTKRGDPSGTWTHTFSLWCMNPAVVFKDLAD
ISLSVILTSGTLSPMNSFSSELGMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASY
KTADAYSFQDALGKSLEEICTIVPGGSLVFFPSYKLMEKLCMRWRETEQWSRLCLKKDLF
VEPRGGAQDEFDSVLKGYYDSIRGKNKIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCR
GKVSEGIDFADDNARAVIIVGIPFPNLHDIQVGLKKKYNDTYKSSKSLLGGSEWYCQQAY
RALNQAAGRCIRHRFDYGAIIFLDERYKEQRNRASISKWLRQSIKVYDNFEASMEGLRSF
FNSVKEQVDSKMLGSQEDSVEKNFSSEKQSKEFRRKENQIQNKSSQVEPKVEDYTNSNPK
YHFMYESKAFGYHRDVKPKIAEDLRSMGHSAQTFVQVKEEAECCREVIDLECGVQPDLGY
CEVSSVTNCDEAPETSFVQETSGMINGISVASPCSCSMNESSSPATVGLRSPGSPDQLLK
QHISTPNFRKSPLGTESSVVATSERYSFGGTRSLTLEAESSFNMSVNSQALKRRKFTSSP
VIDLEVENSDAPRPSTRPSDHTSLTRRIEFGFTEPRSQNYNIYSFPEVNQKVQLSCSLCR
SPLGLPENHSYVNCLLTSSSKKYLLSLLKKTSRTGAAEMSTSVSIIMTDCSMVNQRLCRK
FEGLKGQGIWCEQDGCVFNTIYCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEV
TNEAASKDSTLKHKEPLAETNAAVDKSDVLKSIDRFAYSPNQQQESGGWRTTKSKLRLPK
RNLPTSKKA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctcaaccagcaaatcggattcaaaggaagaagtgaaacaaaccctaaactcc
aaaaaccctaaaaatgtctaccaaatcggaggccttcaagttgaattcccttatcaaccg
tatggaacccagcttgcgttcatgagccgggtcatatctacgctcgatcgtgcccagaga
gacggtcactgccacgcgttgctcgagtctcccactggcacgggcaaatctctgtcattg
ctctgctcagttctcgcttggcaacagaactataaatcccggcttctaaaaggaaatttg
tctcattcgaaagctgcccctgaagcagccaccgatccattgaatcatggaggtggattc
ataccggaaacgcaaccctcagatactcctgcatctacaaatgtggagaaagctgaaact
gcaactaagaagagaaccaaaattcctaccatatactatgcttcacgaactcattctcag
attactcaagtgattcgtgagtataggaaaactggttacagagtccccatggctgtattg
gcttcaagaaaacattactgcacgaatcgtcatgtacttgggaaagacaatgtagatgat
gaatgtcggttactcttaaaagataaggcaaacatacaatgttctgaattcaagaacgtc
aataaaatcacatctcatccatcacttcagcccagaggtcacaatgaggttcatgatatt
gaagatcttgtaaaagttggaaaaaatgttagaggctgcccatattttgcttcctggtca
atggctgagaacgcacaattggtgttttgcccttattcctatatagttaatcctgtcatt
cgagcaggagttgaagtagatctgaaaggagcgattatcatttttgatgaagcacacaat
atggaagacattgctcgtgaagcaggtagcattaatttggaagaagacactcttttcaaa
ttacagaatgaactagaacagatgagcgtggcgcagccaatgatttatcaacccttgtgt
gaagtagtagagggactgataagctggattggaagaaaaaaggactcattagcaaaacgt
gattttcagcattatttctctagctggactggagacaaagctttaagagagcttgaggaa
tctaatatcactcgtgaatgcttcccgatcttattggaatgctttacaaaggctatcaga
acatcaaaggaggcagaaatggaatcagatatgctttatttgagcgggatatctgtcttg
acactagaagagttgttctcttcactaacgtacttcttttcaagaaatggaagtcacatc
ttagattaccaactgggtttgcaacgttctactaaaagaggagatccttctggtacctgg
acgcatactttcagcttgtggtgcatgaatcctgctgttgttttcaaagacttagctgat
atatcattatccgtcattttaacatctgggactttgtcaccaatgaattctttctcatct
gaacttgggatgcagtttggcacttctttagaggctccacatgttattgatcctaatatg
caggtgtgggcgggtgcaatctccaatggtcctagtaattatcctctaaatgcaagttat
aaaacagctgatgcatattcattccaggatgctctggggaaatcattggaagaaatctgc
actattgtaccaggtggctctcttgtattctttccaagctataagttgatggaaaaactc
tgcatgcgttggcgtgaaactgagcagtggtctcggctctgcttgaaaaaggaccttttt
gttgaaccaagaggaggcgcccaggacgaatttgattctgttctgaagggatattatgat
tctatacgcgggaagaataaaataattggaagaaatagaagagctaagaaagcagggcct
attaaaactgagactcaagatgattccaagaagggagctgcatttcttgcagtgtgtaga
ggaaaggtttcagaagggattgactttgctgatgacaacgccagggcagtgataattgtt
ggcattccatttccaaacttacatgatattcaagtcggactgaagaaaaaatataatgat
acctacaagtcatctaaaagtcttcttggagggagtgaatggtattgccaacaggcctat
cgtgcgctaaatcaagctgcaggacgatgtatccggcataggtttgattatggtgccatc
atattcttagatgagcgatacaaagaacaaaggaacagagcgtctatttcaaaatggcta
aggcagtctatcaaagtgtatgataattttgaagcatctatggaaggcttgagatctttt
ttcaacagtgtcaaggagcaagttgacagtaagatgttagggtcccaggaggattctgtt
gagaagaacttttcctcggaaaaacaaagcaaagaattcagaaggaaggaaaatcagatt
cagaacaaatctagtcaagtggaaccaaaagtggaggactacacaaattcgaatccaaaa
tatcattttatgtacgaaagcaaagcctttgggtatcacagagatgtgaaaccaaaaata
gctgaagatttgagatccatggggcattcggcgcagacatttgttcaagttaaagaggaa
gctgaatgctgtagagaagttattgaccttgagtgcggtgtccaacctgatcttggttac
tgtgaggtatcatcggtgaccaactgtgatgaagctccagaaacatcttttgtccaggaa
acatctggtatgatcaatggtatttcagtagccagtccatgttcttgctcgatgaatgaa
agctctagtccagcaacagtaggtctgagatctccggggtctcctgatcaattattaaag
cagcatatatctactccaaatttcagaaaatctcctcttggaaccgagtcgtctgtagta
gcaacttctgagagatattcatttggtggcacccgtagtttgactctagaagcagagtca
tctttcaacatgagcgttaattctcaagctttgaagcgaagaaagtttaccagctctcct
gtcattgaccttgaagtcgaaaacagtgatgctcctaggcctagtactagaccctcggat
catacgagtttaacaagaagaattgagtttgggtttaccgaaccaagatcccaaaactac
aacatatattcttttccagaagtgaatcagaaagtgcagctatcttgttcgctctgcaga
agtccattaggtctacctgagaatcactcatatgtcaattgcttgttgacttcgtcatcg
aaaaagtatttgctgtctcttctgaaaaaaacgtcaagaactggagctgcagaaatgtca
acaagtgtttcaattatcatgacagattgctcaatggttaatcagagactctgcagaaaa
tttgaaggcttaaaaggtcagggtatttggtgcgagcaagatggatgtgttttcaatact
atctattgccctttctgcagcatcccaaacacatgtctcggagtgcaagtcatggctact
gattcatcaaatgtccagtttttgagcaaaattttgttctttgctgatcatctagaagtc
accaatgaagctgcaagcaaggattcaacgttaaagcacaaggaacctcttgctgagact
aatgcagctgtggataagagtgatgtgttaaagtcaatagacagatttgcatactcccca
aatcagcagcaagaatcaggaggctggaggactacaaaatcaaagttgagactacctaaa
cgaaatttgccaacgagcaagaaggcctag
DBGET
integrated database retrieval system
