Arabidopsis thaliana (thale cress): AT1G20750
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Entry
AT1G20750 CDS
T00041
Name
(RefSeq) RAD3-like DNA-binding helicase protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT1G20750
03460 Fanconi anemia pathway
AT1G20750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G20750
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AT1G20750
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
AT1G20750
FA (Fanconi anemia) pathway
Downstream FA components
AT1G20750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
838665
NCBI-ProteinID:
NP_173498
TAIR:
AT1G20750
UniProt:
F4HUN8
LinkDB
All DBs
Position
1:complement(7203302..7209013)
Genome browser
AA seq
1144 aa
AA seq
DB search
MASTRSKSDSKEEVKQTLNSKNPKNVYQIGGLQVEFPYQPYGTQLAFMSRVISTLDRAQR
DGHSHALLESPTGTGKSLSLLCSVLAWQKSYKSRFPNGNLSHSKTQPSDIAGSSNVEPHE
PQIPTIYYASRTHAQITQVIREYRKTGYRVPMTVLGSRKRYCTNSHVQGKENVDEKCRLL
LKDKKNIKCAEFNGVGRILAYPSLQQTGHNGVHDIEDLVKIGKTVTGRLLKSFTVHSNME
DIAREAGSINLEEDIIFKLKNELEQMSEVEPEIYDSLYEVVEGLISWIGRKKDSLAKRDV
DHYFSNWTGDRALKELKEFNITRENFPNLKACFNQAITKSEAAEIDPDKPYLSGISVSTL
EELFATLTYFFSRNGSHVLDYEMGLQRSAKRGDNGWTNTFSLWCMNPSVVFKDLADLSLS
IILTSGTLSPMNSFSSELGMQFGTCLEAPHVIDPNMQVWAGAISTVPGNYPLNASYRTAE
AYAFQDALGKSLEEICTIVPGGSLVFFPSYKLMEKLCTRWHETGQWSRLCLKTDLFIEPR
GGSKDDFETVLKEYYDSISGKNRLIGRNSSVKKAGSVITEAQDDSKRGSAFLAVCRGKVS
EGMDFSDDNARAVIIVGIPLPNLGDILVELKRKYNDTNKSSKNLLGGSEWYCQQAYRALN
QAAGRCIRHRFDYGAIIFLVIVALRLPTTKEQSVYFKVAKASIKVYDNFEASMEGLRYFF
SSVKERVDSKMLESHEQNLSSENQRNEFVRKENQTQNKSSHVEPKQTIPAHTFIQVKREA
ECCKGVIDLDCEVQPEPGYCEESSVTNCDEDPETSFVSGMINGIATARPCSSSKYESSSL
ETGLRSLKSPDQFLKRHVSNANFRRSPLGAESSVTPERYSIGDMRNMTLEAESPLNMSVN
SHVLKRRKFTTSPIIIDLEEENSNAPDNRPEDHTSFTRRIEFGFPEVDQRVMRISCSLCR
STLSHPENNSYPICMLTSSSKTYLLSLLKETSGTGSAEMPTSVSVIMTDCSLVNQRLCTN
SESSNGQGIWCQQDGCVFKTIFCPFCSVPNTCLGMQVMATDSSNVQFMSKILFFADHLEV
TNDAASKETRLTHKSFFIQMPKDIISSAFGTSLLQVTTDFRPLKIAYGKETVVQIGKLCS
IDPT
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacaagaagtaaatcggattcgaaggaagaagtgaaacaaaccctaaactcc
aaaaaccctaagaatgtctaccaaatcggaggccttcaagttgaattcccttaccaaccc
tacggaacacagcttgcgttcatgagccgggtcatatctacgcttgatcgtgcccagaga
gatggtcactcccacgcattgctcgagtctcccacgggtacaggcaaatctctgtctttg
ctctgctccgttctcgcttggcaaaagagctacaaatctcggtttcctaatggaaatttg
tctcattcgaaaacgcagccctcagatattgctggatctagtaatgtggagccacatgaa
cctcagattcccaccatatactatgcttcacgaactcatgctcagatcactcaagtcatt
cgtgagtatcgaaaaaccggttacagagttcccatgactgtattgggttcaaggaaacgt
tactgcaccaatagtcatgtacaggggaaagagaatgtagacgaaaaatgtcggttgctc
ctaaaagataagaaaaacataaaatgtgccgagttcaatggcgtcggtcggatcttagct
tacccatcacttcagcagaccggtcacaatggggttcatgatattgaagaccttgtaaaa
attggaaaaactgttacaggccgtctactaaaatctttcactgtccacagtaatatggaa
gacattgctcgtgaagcaggaagcattaacttggaagaagacattattttcaaattgaag
aatgaactagaacagatgagtgaggttgagccagagatatatgattccttgtatgaagta
gtagagggattgataagctggattggaagaaagaaggattcactcgcaaaacgtgatgtt
gaccactatttctctaactggactggagatagagctttgaaagagctaaaggaattcaat
atcactcgagaaaacttcccaaacttaaaggcatgttttaaccaagcgatcacaaaatca
gaagcagcagaaattgacccggataagccttatttgagtgggatatctgtctccacacta
gaagagttgtttgctacacttacatacttcttttcaagaaatggaagtcacgtcctagat
tatgaaatgggtttacaacgttctgctaagagaggagataatgggtggacgaatactttc
agtttatggtgcatgaatccgtctgttgttttcaaagacttagctgatctgtctttatcc
atcattttaacatctgggactttgtcaccgatgaattctttctcatctgaacttgggatg
cagtttggtacttgtttagaggctccacatgtgattgatcctaatatgcaggtgtgggct
ggtgcaatctccactgttcctggtaactatcctctaaacgcaagttatagaacagctgag
gcatatgcattccaggacgctctagggaaatcattggaagaaatctgcactattgtacca
ggtggctctcttgtattctttccaagctataagttgatggaaaaactttgcacacgttgg
catgaaactggacaatggtctcggctctgcttgaaaacagacctttttatcgaaccaaga
ggaggatccaaggacgatttcgaaactgttctcaaggaatactatgattcgataagcgga
aagaacagattgattggaagaaatagcagcgttaagaaagcagggtctgttataactgag
gctcaagatgattccaagagaggatctgcatttcttgcagtatgtagaggaaaggtttca
gaagggatggatttttctgatgacaacgccagggcagtgataattgttggcattccactt
ccaaacttgggcgatattctagtcgagctaaagagaaaatataatgataccaacaaatca
tctaaaaaccttcttggagggagtgagtggtattgccaacaggcgtatcgtgctttaaat
caagcagcaggacgatgtatccgtcataggtttgattatggtgccatcatattcttagtt
attgtagctctgaggttaccgacaaccaaggaacagagcgtctatttcaaagtggctaag
gcatctatcaaagtgtatgataattttgaagcttctatggaaggactaagatattttttc
agcagtgtcaaggagagagttgacagcaagatgttagagtctcatgagcagaacttgtcc
tctgaaaaccaaagaaatgaattcgtaagaaaggagaatcagactcagaacaaatctagt
catgtggaaccaaagcaaacaatacctgctcacacattcattcaagttaaaagggaagct
gaatgctgcaaaggagtcattgaccttgactgcgaggtccaacctgagcctgggtattgt
gaggagtcatcggtgaccaactgtgatgaagatccagaaacatcttttgtctctggtatg
atcaatggtattgcaacagccagaccatgttctagctcgaagtatgaaagctctagccta
gaaacaggtctgagatctctgaagtctcctgatcaattcttaaaacggcatgtatctaat
gcaaatttcagaagatctcctcttggagctgaatcgtctgtaactcctgagagatattcc
attggtgatatgcgtaatatgactctagaagcagagtcacctttgaacatgagtgttaat
tcacatgttttgaagagaagaaagtttactacatctccaatcatcattgaccttgaagaa
gaaaacagtaatgctcctgacaatagacccgaggatcacacgagtttcactagaagaatt
gaatttgggtttccagaagtggatcagagagtgatgaggatatcatgttcactctgcaga
agtacattaagtcaccctgagaacaactcatatcccatatgcatgttgacttcgtcgtcc
aaaacctatttgctgtctcttctgaaagaaacatcaggaacaggttctgcagaaatgcca
acaagtgtttcagttatcatgacagattgctcattggttaatcagagactctgcacaaat
tctgaaagctcaaatggtcagggtatttggtgccagcaagatggatgtgttttcaaaact
atcttctgccctttctgtagtgtcccaaacacctgccttggaatgcaagtcatggctact
gattcatcaaacgtccagtttatgagcaaaattttgttctttgctgatcatctagaagtc
acgaatgatgctgcaagcaaggaaacaaggttaacgcacaagtctttttttatacaaatg
cctaaagatataatctcatcagcttttggtacatctctgttacaagttacaactgatttc
agacctctaaagattgcatatgggaaagaaacagtggtacagatcgggaaactttgctct
attgatccaacataa
DBGET
integrated database retrieval system
