Arabidopsis thaliana (thale cress): AT1G22020
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Entry
AT1G22020 CDS
T00041
Symbol
SHM6
Name
(RefSeq) serine hydroxymethyltransferase 6
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00260
Glycine, serine and threonine metabolism
ath00460
Cyanoamino acid metabolism
ath00630
Glyoxylate and dicarboxylate metabolism
ath00670
One carbon pool by folate
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01200
Carbon metabolism
ath01230
Biosynthesis of amino acids
ath01240
Biosynthesis of cofactors
ath04981
Folate transport and metabolism
Module
ath_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AT1G22020 (SHM6)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT1G22020 (SHM6)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AT1G22020 (SHM6)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AT1G22020 (SHM6)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AT1G22020 (SHM6)
Enzymes [BR:
ath01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AT1G22020 (SHM6)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
838807
NCBI-ProteinID:
NP_001323098
TAIR:
AT1G22020
UniProt:
Q9LM59
A0A7G2DUS2
Structure
PDB
PDBj
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All DBs
Position
1:7754281..7758029
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AA seq
599 aa
AA seq
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MDRIAQSDLSLGFGSSHALPLPHPPRIPIADDSITLQIDSSFRPSSNPMPPVPLQLLEQR
FDVTGSCSRVVEEDDEVVGDNDDDDQREEEQFILLGHPMKLKRGRGGNSYSLASSSPCKR
FVVDSGIESRRAVVRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEA
LGSHLTNKYSEGMPGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSAN
FAVFTGLLMPGERIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDY
DKLEEKALDYRPKILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPN
PFDYCDIVTSTTHKSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFP
SLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHL
LLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEF
ETMADFLYRAAQIASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtatagctcaatcagatctctctttaggattcggtagctcccacgctttacct
ctacctcatcctcctagaatcccaatcgctgatgactcaatcacgcttcagattgattcc
agcttccgtccttcgtctaatcctatgcctcctgttcctcttcagttacttgagcagaga
ttcgatgtcaccggatcctgtagccgagttgttgaggaggacgatgaggttgttggtgat
aatgatgatgatgatcaaagagaagaggagcaatttattctcttgggtcatcctatgaag
ttgaaacgaggtagaggtgggaattcgtattcattggcatcatcaagtccttgtaagaga
tttgtagttgattcagggattgaaagtaggcgagctgttgttagagcttggggtaatcag
tcgattgaagaagctgatcctgagattcatgagtttatggaaaaggagaagcagagacaa
tttagaggtattgagcttatagcttctgagaatttcgtgtgtagagctgtgatggaagct
ttaggaagtcatttgactaataagtactctgaaggaatgcctggagctagatactatacg
gggaatcagtatattgatcagattgagattctttgccaagagcgtgcgcttgcagctttt
ggactaaatcatgagaaatggggagttaatgtgcagccttattcgtgcacttctgccaat
ttcgctgttttcactggtcttttgatgcccggtgaacgaattatgggattggattctccc
tcaggtggtcatatgagtcatgggtattatacaccaggtgggaagaaagtctctggtgcg
tctatattctttgagagctttccatataaggttgaccctcgtacagggtatattgattac
gataagcttgaggaaaaggcgcttgactatcgtcctaagatacttatttgtggtgggagt
tcatatccgagggactgggaattccctaggtttaggcatattgcagacaaatgtggagct
gttttgatgtttgacatggcacagattagtggtcttgtcgctgccaaggaaagtccaaat
ccattcgattattgcgatattgttacctcaacaacacacaagtctctccgtggccctagg
ggcggcatcatattttacaagagaggcttgaagcccaagaagcaaagcataaatcttaat
cactgtgagagcaatatccagtatgattttgaagaaaaaatcaacttttctgtctttcca
tcgttgcaaggggggcctcacaataaccatatagctgctctagccattgccctcaagcag
gccgcttcaccagagtacaagctttacatgcgacaggtcaaaaaaaatgctaaggcttta
gcatctgctttgataagcagaaagtgcaagctgataacaggtggcaccgataatcatttg
cttctctgggatctgactcctttgggcttgacaggcaaggtgtatgagaaagtttgcgag
atgtgccatatcacggtcaacaaagtggccattttcagcgaaaacggtgttatttcccct
ggaggagtgagaataggcagtccggctatgacctcaagaggttgtttagaaccagaattt
gagacaatggctgattttctatatagagctgctcagatagctagtgctgcacaaagggaa
cacgggaagttgcaaaaggaaccgctcaaaagcatctatcactgtaaagagattgcagat
cttcggaaccaagtcgaagcttttgctactcagtttgcaatgcctgcctttgacatgtga
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