Arabidopsis thaliana (thale cress): AT1G22670
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Entry
AT1G22670 CDS
T00041
Name
(RefSeq) Protease-associated (PA) RING/U-box zinc finger family protein
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT1G22670
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT1G22670
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT1G22670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
838873
NCBI-ProteinID:
NP_173681
TAIR:
AT1G22670
UniProt:
F4I2Y3
A0A178WJS9
LinkDB
All DBs
Position
1:complement(8021835..8023516)
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AA seq
422 aa
AA seq
DB search
MNLVVLLILTLLLFIVSYVVDAGQVILVDSNITRSFVDMEADFSPSVTTVETGVVYVAEP
LNACRNLRNKPEQSPYGTSPLVLIIRGGCSFEYKVRNAQRSGFKAAIVYDNVDRNFLSAM
GGDSDGIKIQAVFVMKRAGEMLKKYAGSEEMEVMLVPPNTEDSVWSLYASIALILSLAIF
CVMVTCVFFYRYCSTIRNSTSQFNGMCRRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYI
VGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEPLATESTPFLSSSIATS
SLVCIDSPPLGSSVSFSPAHVSSSFIHQFVRSSPMNGSRISENLRRQASPLQSSSQRSHL
SMKSSHSLGYSTMSPLNAMGMSPYRPYPSNASPGLFSSTNHLLSNYTANTFSHFASAHSL
PD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgttgttctgctaatcctaacattactccttttcattgtttcttatgtagta
gacgcaggccaagtcattttggttgattccaacataactcgctcttttgtcgacatggaa
gctgatttctctccatcagtgactacggtggaaaccggagtggtttatgtagctgagcct
ctcaacgcttgccgaaacttgaggaataaaccggagcagagcccttatggtacttcccct
cttgtgttgatcataagaggaggctgcagttttgagtacaaagtcagaaacgcgcagaga
agcggtttcaaggctgccattgtctatgacaatgtggaccgcaacttcttatccgcaatg
gggggagactcggacggtataaagattcaagcggtttttgtgatgaagagagccggagaa
atgctcaagaagtacgcgggttcggaggaaatggaagtcatgttggttcctcctaataca
gaggactcggtgtggtcattgtacgcttccatagcattgatcttgtcgctggctattttt
tgtgttatggttacttgtgtcttcttctatagatattgctcaacaattagaaactctaca
tctcaattcaatgggatgtgccgtagaacggtgaaagcaatgccgagtgttacattcact
tgtgcaaaaatagacaacactacaggtttctcttgcgctatctgccttgaagactacatt
gttggagacaagctcagggtcttaccttgcagtcacaagtttcatgtcgcttgcgtagac
tcgtggcttatatcatggagaacgttttgtccagtgtgtaaacgggatgcgagaacgacc
gcagatgagccactagctacagagagcacaccgtttctcagttcttccattgcaacatca
tctctagtgtgtatagactctcctcctttgggatcctcagtttctttctctccagcgcat
gtgagctcgtccttcattcatcaatttgtcaggtcttcgccaatgaatggcagccgtatc
tcagagaatcttaggcgacaagcctcaccattacagtcatcatcacagcgatcacacctc
tctatgaagtcttcccattcactgggttattcgaccatgtcacctctcaacgcgatgggc
atgtcaccataccggccatacccaagcaatgcatcgcctggattattcagttcaacaaat
catctgctttccaattatacagcaaatacattctctcatttcgcctctgcacactcgctt
ccggactag
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