Arabidopsis thaliana (thale cress): AT1G23400
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Entry
AT1G23400 CDS
T00041
Symbol
CAF2
Name
(RefSeq) RNA-binding CRS1 / YhbY (CRM) domain-containing protein
KO
K27710
CRS2-associated factor 2, chloroplastic
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G23400 (CAF2)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AT1G23400 (CAF2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
838948
NCBI-ProteinID:
NP_173754
TAIR:
AT1G23400
UniProt:
Q9LDA9
A0A178WC04
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Position
1:complement(8311984..8315876)
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AA seq
564 aa
AA seq
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MAIVASLRDINLFSSLPSTPPMADSSSGTFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNP
KKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSET
PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMP
GPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSH
WKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPL
MLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFE
LSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIPS
LSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDDL
LKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSDIDDDFDDECSDDES
LDPVGPVGSLPVDKIVRKLRERLK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgtagcatcactaagagatattaatctcttctcttcacttccttcaacgcct
ccaatggcggattcatcatcaggaacattccggccagctccgccgataccgattcccaaa
tacgcaccatccaatagaaatcgtaatcagaaaactaatcatcaaaccgatacaaacccg
aagaaaccacaatcaaatccagctcttaagcttccgcatcaccgaaccagatactacaaa
ccggttaaggaaggagttatctcctcagacggtgaccgcacaatcttaatcggcgattcc
ggcgtctcgtatcagcttcccggtgcaccgttcgagtttcaattcagctattctgagaca
ccgaaagttaaaccggttgggattcgtgaaccggcttttatgccgtttgctccaccgacg
atgccgagaccgtggactgggaaagcaccgttgaagaaatcgaagaagaagattccattg
tttgattcttttaatccaccgccggcgggaaaatctggagttaagtatgtagaaatgcct
gggccgttaccgtttgggaggtatccaaaggaaggaatgaatagagaagaggttttagga
gagccattgaagagatgggagaaaggaatgttgattaagcctcatatgcatgataatcgt
caggttaatttgggtagagatggatttacacataatatgttggaattgatacattcgcat
tggaagagacgacgtgtttgtaaagttcgatgtaaaggagttcctactgtggatatgaat
aacgtgtgtcgtgttcttgaggaaaagacaggaggagagatcattcatagagttggaggt
gtggtgtaccttttcaggggtaggaattacaattaccgtacacgtccgcagtacccattg
atgttgtggaaaccagcagctcctgtttatccaaagcttattcaagaagttcctgaagga
ttgacgaaagaggaagctcatgagttcagggtgaagggaaagtctcttaggcctatatgc
aagttgtctaaaaatggagtttacgtgtcgctagtcaaagatgtgagggatgcctttgaa
ctgagttcattggtgaaagtcgactgcccagggcttgaaccaagtgattataagaaaatt
ggcgctaagctcaaggagttagttccttgtgtgcttctgtctttcgatgatgagcaaata
ctcatgtggagaggacgagaatggaagtcgcggtttgtagacaatcctctaattccaagc
ctttctgagaccaacacaacgaacgaacttgatccctcagacaaacctagtgaagaacaa
actgtggctaatccaagtacaacgatctcaagccccaaaatgatctcgctctggcaacga
gcgttggaatcgtcgaaggctgtgattcttgaagagcttgacctcggtccagacgatcta
ttgaagaaggtggaagagttagaaggcacttcactggctgcagaacacacttacacagct
atggtcttgtcaaatactgatggtgcagcagaggattacgtggatgaaaaggaccggtcc
gaagagtattatagtgacatagacgatgactttgatgacgagtgttccgatgatgagtcg
ctagatccggttggtccagtgggatctttacccgttgacaagatagttaggaagttgagg
gaaagactaaaatag
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