KEGG   Arabidopsis thaliana (thale cress): AT1G23410
Entry
AT1G23410         CDS       T00041                                 
Name
(RefSeq) Ribosomal protein S27a / Ubiquitin family protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03010  Ribosome
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    AT1G23410
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT1G23410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ath03011]
    AT1G23410
   04121 Ubiquitin system [BR:ath04121]
    AT1G23410
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT1G23410
Ribosome [BR:ath03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    AT1G23410
  Archaea
    AT1G23410
Ubiquitin system [BR:ath04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   AT1G23410
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT1G23410
  Exosomal proteins of colorectal cancer cells
   AT1G23410
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD Ubiquitin_5 UBL_UBAC1 DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 838949
NCBI-ProteinID: NP_173755
TAIR: AT1G23410
UniProt: P59271 A0A178WHK4
LinkDB
Position
1:8314853..8315737
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE
CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADEE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacaataaccttagaggtagaatcatca
gacacaatcgacaatgtgaaagcgaagatccaagacaaggaaggaatcccaccggatcag
caacggttgatcttcgccggaaaacaattggaagatggaagaacactagctgattacaac
atccagaaagagtcgacgcttcatttggttctacgtctgagaggaggtgcgaagaagagg
aagaagaagacgtacacgaaacctaagaagattaagcatacgcacaagaaagtgaagcta
gcagttctgcagttttacaaggttgatggaagtgggaaagttcagaggttgaagaaagag
tgtccttctgttagttgtggtcctggaactttcatggcgagtcatttcgataggcattat
tgtgggaaatgtggaactacttacgtgttcaagaaggctgatgaagagtag

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