Arabidopsis thaliana (thale cress): AT1G23820
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Entry
AT1G23820 CDS
T00041
Symbol
SPDS1
Name
(RefSeq) spermidine synthase
KO
K00797
spermidine synthase [EC:
2.5.1.16
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00270
Cysteine and methionine metabolism
ath00330
Arginine and proline metabolism
ath00480
Glutathione metabolism
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00034
Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AT1G23820 (SPDS1)
00330 Arginine and proline metabolism
AT1G23820 (SPDS1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AT1G23820 (SPDS1)
Enzymes [BR:
ath01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.16 spermidine synthase
AT1G23820 (SPDS1)
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Gene cluster
GFIT
Motif
Pfam:
Spermine_synth
Spermine_synt_N
Methyltransf_25
Methyltransf_30
MTS
Methyltransf_11
Methyltransf_12
Methyltransf_4
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
838993
NCBI-ProteinID:
NP_173794
TAIR:
AT1G23820
UniProt:
Q9ZUB3
A0A178W1L5
Structure
PDB
PDBj
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All DBs
Position
1:8420265..8422985
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AA seq
334 aa
AA seq
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MDAKETSATDLKRPREEDDNGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAH
SLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPN
PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI
GDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL
HMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDESS
SKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgctaaagaaacctctgccaccgatttgaaaagaccgagagaagaggatgataac
ggcggcgccgctaccatggagacggagaacggagatcagaaaaaggaacctgcttgtttc
tccactgttattcctgggtggttctctgaaatgagtcctatgtggccaggagaggcacac
tcattgaaggttgagaaagttttgtttcaagggaaatcagattatcaggatgttattgtt
ttccagtctgcaacatatggaaaagttttggttttggatggagtaatccaacttacggag
agagatgaatgtgcttatcaggaaatgatcactcatcttcctttgtgttctatccctaac
cctaagaaggttttggtcattggaggaggagatggaggtgtcctgcgggaagttgcacgc
catgcttctattgagcagattgacatgtgtgaaattgataaaatggtggtcgacgtgtct
aagcaatttttccctgatgtagcaattggatatgaggatcctcgcgtgaaccttgtcatt
ggcgatggtgttgctttcttgaagaatgctgctgaaggatcatacgatgcagttattgtt
gactcttcagatccaatcggtcctgcaaaggagctgtttgagaaacccttcttccaatct
gtggctagagctcttcgtcctggtggagttgtgtgcactcaagctgaaagcttgtggctt
cacatggacatcatcgaagacattgtttccaactgccgtgagatcttcaagggttctgtg
aactatgcttggaccagcgttccaacataccccagtggggtcattggatttatgctttgt
tcaactgaaggacctgatgttgacttcaaacacccactgaacccaattgacgagagctcc
agcaaatcaaatggacctttgaagttttacaatgccgagattcattcagctgcattctgc
ttgccttctttcgccaagaaggtcattgagtcaaaagccaattga
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