KEGG   Arabidopsis thaliana (thale cress): AT1G24310
Entry
AT1G24310         CDS       T00041                                 
Name
(RefSeq) nuclear pore complex protein
  KO
K14308  nuclear pore complex protein Nup54
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AT1G24310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G24310
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     AT1G24310
SSDB
Motif
Pfam: Nup54
Other DBs
NCBI-GeneID: 839047
NCBI-ProteinID: NP_173841
TAIR: AT1G24310
UniProt: Q8GYF7
LinkDB
Position
1:8624014..8626405
AA seq 377 aa
MFGTPSSSPSFGTPSSTPAFGTSSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFSS
QQPQQQQQQQQQQQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAPI
PYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSKLEG
MDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSNVKMLQRHLQASTFPSI
ERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKLTAITRQVKGPGAELSR
RVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQETEAIGRLGNVLKRDM
RDMEIMVAEDTEMALDS
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgttcggcactccgtcttcatcgccgtcattcggcactccgtcatccacacccgccttt
ggcacatcttctccggcgttcggtacaccgtcagctacgcctgcgttcggtacgccatcg
aatccttccttctcctccggcggatttggctcttcactcttctcgtctcccttctcatct
caacagccacagcaacaacaacaacaacaacagcagcagcagccgagttcactgtttcag
caacagccatcttctaattttggttttcagtcaccattcaacaacaccgctcagcagcag
cagcaaacgcctttcccaaatgctcaattgactactcagatggctcccgttgctccaatt
ccttactctctcgccgatcgtgatgtccaggctatcattgaagcttataaggaagatcca
acgaatcccaagtatgcttttcagcatcttttattcagtgtgactgaaccacagtaccgg
gtgaagcctgcagctgtatcagatataatgtgggcagaggccatgagcaaacttgaaggt
atggattcaacagaaagagagcgcctttggcctcagcttgtgcaaggtttcaaagatctc
tctcagcgccttaagcttcaagatgaagttctcgtctcagatagggatagaataaaaacg
actcagagcaatgttaaaatgcttcagagacatttgcaagcatcaaccttcccatctatt
gaaaggttgagacagaaggagcagagtcttcaaagacgcatgttgagggtgatgaggatt
atagaaggcttagaagggaagggtttccggttacccttgacgaaaggagaggccgaactg
tctgagaagttaactgcaataacaagacaggtgaaaggtcctggagcagagctttctagg
agggtgcaaagtctgcagacgatatctcgtgctcaagcaaattcaattgctgctggtagt
tccctttatctccctgggtcaactaaaatagacgagcagagcttgatagatatgcaggag
gtattgcaacaagagacagaagccataggaagacttgggaacgtattgaagcgagacatg
agggatatggaaatcatggtggctgaagatacagaaatggcactagactcatag

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