Arabidopsis thaliana (thale cress): AT1G24706
Help
Entry
AT1G24706 CDS
T00041
Symbol
THO2
Name
(RefSeq) THO2
KO
K12879
THO complex subunit 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G24706 (THO2)
09122 Translation
03013 Nucleocytoplasmic transport
AT1G24706 (THO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G24706 (THO2)
03041 Spliceosome [BR:
ath03041
]
AT1G24706 (THO2)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AT1G24706 (THO2)
Spliceosome [BR:
ath03041
]
Complex C
Other components
EJC/TREX
AT1G24706 (THO2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AT1G24706 (THO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TEX47
Motif
Other DBs
NCBI-GeneID:
839081
NCBI-ProteinID:
NP_001185086
TAIR:
AT1G24706
UniProt:
F4IAT2
LinkDB
All DBs
Position
1:8741836..8755604
Genome browser
AA seq
1823 aa
AA seq
DB search
MSLPLLECKYVTEEFVREGKNGNYGTKLPSSVPMLRFLYELSWILVRGELPIQSCKAVLE
GVEFLDKPSREELASCFADVVTQIAQDLTMSGDQRSRLIKLAKWLVESQTVPQRLFQERC
EEEFLWEADMVKIKAQDLKGKEVRLNTRLLYQQTKFNLLREESEGYAKLATLLCRGSASS
SHNASAATMGIIKSLIGHFDLDPNRVFDIVLDCFELEQDYDTFLNLIPIFPKSHASQILG
FKFQYYQRLEVNSPVPVGLYKLTALLVKEEFINLESIYAHLLPKDEEVFEDYNVSSAKRF
EEANKIGKINLAATGKDLMEDEKQGDVTVDLFAALDMESEAVTERLPELENNQTLGLLNG
FLSVDDWYHANILFERLAPLNPVAHDQICSGLFRLIEKSITHSYRIARQTRFQSSSSAST
VKLTPTANTTANRTYLDLPKEVFQMLVTVGPYLYRNTQLLQKICRVLRAYYLSALDLVRD
GSNQEGSAYEVSRGHLKEVRLRVEEALGTCLLPSLQLVPANPAVGHEIWEVMSLLPYEAR
YRLYGEWEKDDEQNPLLLAARQVAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLR
TIVNQIEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLAQSGRDKLKDDGINLSDWLQS
LASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELVQQMANVQYTENLTEDQL
DAMAGSETLRYHATSFGMMRNNKALIKSSNRLRDSLLPNDEPKLAIPLLLLIAQHRSLVV
VNADAPYIKMVTEQFDRCHGILLQYVDFLSSAVSPTTAYARLVPSLDELVHTYHLEAEVA
FLVFRPVMRLFKCRRNGDVSWPLDSGESMDADSEISESESSMILDVGTSEKAVTWSDVLD
TVRTMLPSKAWNSLSPDLYATFWGLTLYDLHVPRNRYESEISKQHTALKTLEEVADNSSS
AITKRKKEKERIQESLDRLTGELKKHEEHVASVRRRLSREKDTWLSSCPDTLKINMEFLQ
RCIFPRCTFSMADSVYCAMFVNMLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGR
LGRFLFETLKIAYHWKSKESVYEHECGNMPGFAVYYRYPNSQRVTFGQFVKVHWKWSGRI
TRLLIQCLESNEYMEIRNALIMLTKISGVFPVTRKTGINLEKRATKIKNDEREDLKVLAT
GVGAALSARKPHWVTDEEFSMGFLELKAPPVHTPKHASSQNGLLVGVSQGEPTGERATVN
QQPESGGLGKDQMLKTKPLDGRTESIPSKSDQGHLKSKGGNPLDSQPSISKKSMEQKETD
ETPRISDENPVKPASKYSEAELKASSKRGASVNKSAKQDFGKDDGKSGKAIGRTSTADKD
LNYLESRQSGLTKALSSTAANGSIATGSSKVKDDGAEALDAQKQSSRTVHSPRHEIVTSV
RSSDRLQKRANAVEDSERISKRRKGDAEHKEHDSEPRSSDRDRSVEARLDLNKTVTDDQS
THRDQDRSKDKGYERQDRDHRERVDRSDKPRGDDVEKARDKSLERHGRERSVEKGLDKGT
TRSYDRNKDERNKDDRSKLRHSEASLEKSHPDDHFHSQGLPPPPPLPPNIIPHSMAAKED
LERRAGGARHSQRLSPRHEEREKRRSEENLSVSVDDAKRRRDDDIRDRKRDDRETITVKG
EEREREREREREREKSLPLKEDFEASKRRKLKREQQVPSAEPGEYSPMPHHSSLSTSMGP
SSYEGRERKSSSMIQHGGYLEEPSIRLLGKEASSKMARRDPDPIAKSKSKNSNFLDIALE
SMTVNGKTTRGEQSGSGEIGSRE
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccgctactggagtgtaagtacgtgacggaggagtttgttcgtgaaggtaag
aatggcaactatggaaccaagctgcccagctctgtgccgatgcttcgtttcctctacgag
ctctcttggattttggttcgtggcgaattgccaattcagagctgtaaggcagtgttggaa
ggtgtggagtttttggataagccatcgagagaagaattagcttcgtgttttgcggatgtt
gtgactcagatagctcaagaccttaccatgtcgggagatcaacgttctcgtctaatcaaa
ttggcgaaatggcttgtggaatcacagacagtccctcaaaggcttttccaagagcgttgc
gaggaggagtttctctgggaagctgatatggttaaaataaaggcccaagatttgaagggg
aaagaggtgcgattaaacactcgtcttctgtaccagcagacaaagttcaacttactccgt
gaagaaagcgagggatatgccaaattggccactcttttgtgccgaggatctgcaagttct
tcgcacaatgcatcagcagcaacgatgggaattatcaagtcattaattgggcattttgac
ctggatccaaaccgtgttttcgacattgttttagattgctttgaactcgaacaagattac
gacacatttctcaatctaattcctatctttcccaagtctcatgcttcacaaattcttgga
tttaaattccaatactatcagagactagaggtgaatagccctgttccagttgggctctat
aagcttacagccttgctagtaaaggaagagtttatcaatcttgaaagcatatatgcacat
ctgctacctaaggacgaggaagtttttgaggattataatgtttcttctgcaaagcggttt
gaagaggccaataaaattggaaagattaatctcgctgctactgggaaggatcttatggaa
gatgagaagcaaggagatgtcacagtagatctctttgctgctttagacatggaaagtgaa
gctgttactgagcgattaccagagcttgaaaataatcagactctgggcctacttaatggt
ttcctctctgtggacgattggtatcatgcaaatatcttgttcgagcgtcttgcacctctt
aatccagtggcacacgatcagatctgtagtgggttgtttaggcttatagagaagtcaatc
actcattcttatcgcattgctcgtcagacacgttttcaaagttcttcttctgcgagcaca
gttaagctcacacccactgctaatacgacagctaataggacttatctagatcttccgaaa
gaagtgtttcaaatgcttgttactgttggaccctacctctaccgcaatacacaattgttg
cagaagatttgtagagtattaagggcttactacttgtcggccttggatcttgttcgcgat
gggtcaaatcaagaaggtagtgcatatgaagtttctcgtgggcacctgaaagaagttagg
ttgagagtggaagaagctctaggaacatgtcttctgccatcgttacagttagtacctgca
aatccagcagttggtcatgagatttgggaagtgatgagtctccttccatatgaggctcgt
tatcgcttatatggtgagtgggaaaaggacgatgagcagaatcctttgttgttggcagca
aggcaagtggcaaagttggatactagaagaattctgaaacggcttgcaaaagaaaatctg
aagcagttaggaaggatggtggcaaaactagctcatgccaatcccatgacggtgcttcgg
acaattgtaaatcagattgaagcatacagagatatgattgctcctgttgtggatgccttc
aagtacttgacacagcttgagtatgatatcctggaatatgtagtgattgagagactggca
caaagcggacgagataaacttaaagacgacgggattaatttatcagactggcttcaatct
ttggcatccttttggggtcacctgtgtaagaagtatccatcaatggagttgaggggtctt
tttcagtatctcgtaaaccagttaaagaggggccaagggattgagcttgttcttctccag
gaactggtccagcagatggcaaatgtacaatacactgagaaccttactgaagatcagttg
gatgccatggcaggaagtgagactttacgttatcatgcaacatcatttggcatgatgcga
aacaacaaggcacttatcaaatcatcaaaccgtctacgagattcgttacttccaaatgat
gaaccaaagttagctatcccccttttgttacttatcgcgcagcatcgttctctagttgtg
gtgaatgcggatgcgccttatattaagatggtcactgaacagttcgacagatgtcatgga
attcttctccaatacgtggacttcctttctagtgctgtcagtcctactactgcttatgct
cggctggtaccttcgcttgatgagcttgttcatacataccatctcgaagcagaggtcgca
tttttggtatttcgccctgtgatgaggctcttcaagtgtcgacggaatggtgatgtttca
tggcctttagatagtggggaatctatggatgcggattctgaaatatcagagtctgagagt
tccatgattctcgatgtcggtacatctgaaaaagctgtaacgtggtctgatgttcttgat
acagtaaggacaatgctgccctcaaaagcttggaatagtctatcgccagacctctacgct
acattttgggggcttacgctttatgatctccatgtccccagaaatcgttatgagtctgag
atatctaaacagcatactgcccttaagacacttgaagaggttgctgataattctagctca
gcaattaccaagaggaagaaagagaaggaaaggattcaagagtctcttgatcgtctaacc
ggtgagctgaaaaagcatgaagaacatgtggcttctgtccgtagaaggctttcacgtgaa
aaggatacatggttgagctcctgtccagatactttgaagattaatatggagttcctgcag
cgttgtattttccctcgttgcacatttagcatggcagattctgtgtactgcgcgatgttt
gtaaatatgcttcactcgcttggaacacccttttttaacactgtcaaccacattgatgtc
ctgatatgtaaaacgctgcaaccaatgatctgctgctgtactgaatatgaagttggaaga
ctggggaggtttttgtttgagaccttgaagattgcataccactggaagagtaaagaatca
gtctatgaacatgagtgcggaaacatgccagggtttgctgtttattatagatacccgaac
agccagcgtgtcacatttggacaatttgtgaaggtacattggaaatggagtggaagaatc
acacgacttttgatccagtgtctggagtctaatgagtatatggagattcgtaatgccctt
attatgttaacaaaaatatctggtgttttcccagttactcggaaaactgggataaacctt
gagaaacgggcaaccaagattaaaaatgatgagcgagaggaccttaaggtcttagcaact
ggtgttggggctgctctgtctgcaagaaaaccacattgggttacagacgaagaatttagc
atgggcttccttgaactaaaggctccgccagtacatactccaaaacatgcttcttcccag
aatggcttgttagttggtgtctcccaaggtgaaccaactggggaaagagctactgttaac
cagcagcctgagtctggtggattgggcaaggaccagatgttgaaaactaaacctctagat
ggaagaacggaaagtataccttcaaaatctgatcaaggacatctaaaatcaaagggaggc
aatccattggattcccaaccatccatatctaagaagtcaatggaacaaaaggaaacagat
gaaacacccagaatatctgacgagaatcctgtcaaacctgcttcaaaatattctgaagcc
gagttaaaagcttcctctaaacgaggtgcgtcagtgaacaaatctgcaaagcaagatttt
ggaaaagatgatggaaagtccggtaaagctattggaagaacatccacagctgacaaagat
cttaattatctggagagcaggcaatcaggtttgaccaaagctctttccagcacagcagcc
aatggtagcatagctactgggtcgtccaaagtaaaagatgatggcgctgaagctttggat
gcacaaaagcaatcttctcggactgttcattcccctaggcatgaaattgtcacttctgtg
agatccagtgataggttacaaaaacgagctaatgctgttgaagatagtgaaaggataagt
aaacgtcgtaaaggagatgctgagcacaaagagcatgacagtgagcctcgatcgagtgac
cgagatagatcagtcgaggcccgattggatttaaacaaaacagttactgatgaccaaagc
acccatagggatcaagatagatcaaaggataagggttatgaaagacaggatcgagaccac
agagaaagagtcgatcgttctgataaacctcgtggagatgatgttgagaaagcacgagac
aaatccttggaacgtcatggtagagaacgctcagttgagaagggtctagataaaggaaca
actaggagttatgatagaaacaaggatgaaagaaacaaagatgatagaagcaaactgcgt
catagtgaagcatcacttgagaaatctcatcctgatgaccattttcattctcaaggttta
cccccacctccacctttacctcctaacatcattccacattctatggccgcaaaagaagac
ctcgaaagaagggctggcggtgcaaggcattctcagaggctttccccgaggcatgaagaa
agagagaaacgacgctctgaagagaatttatcagtttctgtggatgatgcaaaacgtaga
agagatgatgatattagggaccgaaagcgagatgaccgagaaacaatcactgtgaaggga
gaagaaagagaaagggaaagggaaagagagagggaaagagaaaaaagcctccctttgaaa
gaggattttgaagcctccaagagaaggaagcttaagagggagcaacaggtcccatctgca
gagccaggagaatactctcctatgccacatcattcgtctttatcgaccagtatgggacca
tcatcgtacgaaggcagagagcggaagagcagtagtatgattcaacacggaggttatctt
gaagagccaagcatcagacttcttggaaaagaagcttccagcaaaatggctcgtcgtgat
cctgacccaattgcaaaatccaaatccaagaatagcaatttccttgacattgctctagaa
tctatgaccgtgaatgggaagacgacaagaggagagcagagcggaagcggagagatcgga
agtagagagtga
DBGET
integrated database retrieval system
