Arabidopsis thaliana (thale cress): AT1G27650
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Entry
AT1G27650 CDS
T00041
Symbol
ATU2AF35A
Name
(RefSeq) U2 snRNP auxiliary factor small subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G27650 (ATU2AF35A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G27650 (ATU2AF35A)
Spliceosome [BR:
ath03041
]
Complex A
U2 snRNP components
U2 related factors
AT1G27650 (ATU2AF35A)
Complex B
AT1G27650 (ATU2AF35A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Torus
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
839657
NCBI-ProteinID:
NP_174086
TAIR:
AT1G27650
UniProt:
Q9S709
A0A178W2Y4
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All DBs
Position
1:9614551..9616574
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AA seq
296 aa
AA seq
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL
RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKR
SSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREEKEEGGA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcatttggcttcaatctttggtactgagaaagacagagtgaattgccctttc
tacttcaagattggcgcttgccgtcatggtgaccggtgctcgcgtcttcacaaccgtcct
accatctccccaacactccttctttcaaacatgtaccaaaggcctgacatgattacccct
ggtgttgacgctcagggccaaccactcgacccgcgtaagattcaggagcactttgaggat
ttctttgaggatctttttgaggagcttggaaagtttggcgagatagagagcctcaacatt
tgtgacaaccttgctgaccacatgattggcaacgtatatgttcagtttaaggaagaggat
caggctgcagctgctttgcaggctctgcaaggtaggttctattcaggacgtcccatcatt
gctgatttctctcctgtgacggatttccgcgaagccacgtgtaggcagtatgaagaaaac
aactgcaaccgtggtgggtactgtaatttcatgcatgtgaagcttgtttcgagggaacta
aggagaaaactctttgggagatatcggcgatcataccgcagaggaagtagaagcaggagc
agaagcaggagtattagccccaggaacaagagagataatgaccgacgtgatccttctcac
agggaattcagtcatcgggacagagatcgcgagttttaccgtcatggaagtggaaaaagg
agcagtgagaggtcggagaggcaagagagggacggttcaaggggtaggagacaagcaagc
cctaaacgaggagggagcccgggtggcgggagggaaggaagtgaggagaggagggcaagg
attgagcaatggaacagagaacgggaggagaaggaagagggaggagcataa
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integrated database retrieval system
