Arabidopsis thaliana (thale cress): AT1G28060
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Entry
AT1G28060 CDS
T00041
Name
(RefSeq) Pre-mRNA-splicing factor 3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G28060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G28060
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
AT1G28060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
839699
NCBI-ProteinID:
NP_001319094
TAIR:
AT1G28060
UniProt:
Q9C7E7
A0A5S9W5H6
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All DBs
Position
1:9778851..9782907
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AA seq
786 aa
AA seq
DB search
MDKERYSRSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDHYRSSRRGDREDERDR
TKDRRGRSVERGEREGSRDREKHHHERSHEGSKEKESRSKRKDREEENGARDGKKKSRFA
DGNGERRSRFEDVAIEVENKDAQVSEGSGATNPTSGVTMGASTYSSIPSEASAAPSQTLL
TKVSSISTTDENKASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQL
QKGLADRLKNLPLLKKATKPTSEGSPHTRVPPSTTTPAVSTGTSFASTLPHTGLAGFGSI
ANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQRPEKPPVLRVDALGREI
DEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKENPYFDTRMGIDEKKILR
PKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLAKANDDINPNLIEVSERV
PRKEKPKEPIPDVEWWDANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIEPPAEA
APPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGSEAT
QDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIVSVYKIK
KLSHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINWEEAER
KEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVHYWDLA
VNYSDD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagagatattccaggagccaccgtgacgatcgtgatcgagattcgagtccc
gaccattctccacaacgtgaaggaggacgccgccgtgaccgcgatgttgattcgaagcgt
cgtgattcagatcactaccgttcatcgaggcgcggcgatagggaagatgagagagatagg
accaaggatagaagagggagatctgtagagcgaggcgagagagaagggagtagagatagg
gaaaagcatcaccatgagaggtctcacgaaggtagtaaagagaaggaatcgaggagcaag
aggaaagatagagaggaagagaatggggctagggatgggaagaagaaatctaggtttgct
gatgggaatggtgagaggaggagcaggtttgaggatgtggctattgaagttgagaacaaa
gatgctcaagtctctgagggttctggggctacgaatccaaccagtggcgttacgatggga
gcctctacatatagttctattccatcggaagcttctgctgcccctagtcaaacactgctc
actaaggtatcttcgatatctacaacggatgaaaataaggctagtgttgtcagatctcat
gaggttcctggaaaatctagtacagatggaagaccattgtccacagctgggaaaagtagt
gcaaacttgcctcttgattcatcagcgttagcagcgaaagctaggaaagcactacaattg
caaaagggattggctgatagattgaagaaccttcctttgctgaagaaggctactaagcca
acttcagaaggtagcccacataccagagtgccaccatcgactaccactcctgctgtctct
acaggcacatcttttgcttcaacattaccacatactggccttgctggctttgggagtatt
gccaacattgaagctgttaagcgagcccaggagctggcagctaatatgggatttcatcag
gatcgagagttcgctcccgttattaacctatttccaggacaggcaccctcagatatgact
gttgcacagagaccggaaaagccccctgttctgcgcgtggatgcactaggaagggagata
gatgaacacggaaatgtgattagtgtgactaaaccaagcaatcttagtacattgaaggtt
aacataaacaaaaagaagaaagatgcttttcagattcttaaacctcaactggaagcagat
ctaaaagaaaacccctattttgacacaaggatgggtattgatgaaaaaaagattctgaga
cctaaacgtatgagtttccagtttgttgaggaaggtaaatggacaagagatgctgaaaat
ttgaagtttaagagtcattttggtgaagcaaaagcgaaggagctgaaggtgaagcaagca
caactggctaaggcaaacgatgatataaatccaaatttgatagaggtatccgaacgtgtc
ccgagaaaagagaagcccaaggagccaattccagatgttgagtggtgggatgcaaatgtc
ctcaccaatggcgaatacggcgaaataactgatggcaccattactgaaagccatctgaag
atagaaaaacttactcattacattgagcatcctcgtcccatagagccacctgcagaggca
gctcctccaccaccccaacctcttaaactgacaaagaaggaacagaagaaactgcgaacc
cagaggcgtctagcaaaagaaaaggagaaacaggagatgatcagacaagggttgctggaa
ccaccaaaagcaaaggtgaagatgagcaacttaatgaaggttcttggttctgaagcgacc
caagacccaacaaagcttgaaaaagagatccgcacagcagctgctgagcgtgaacaggct
catacagataggaatgctgcccggaagctaactcctgcagagaaacgtgagaagaaagag
aggaagcttttcgatgatccaacaacggttgagacgattgtgtcggtgtacaagatcaaa
aagttatcgcaccctaaaacaagattcaaagtggagatgaatgcaagagagaacagatta
acagggtgtagtgtgatgacggatgaaatgagtgtggttgtggttgagggcaagagcaaa
gcgataaagagatacgggaagctgatgatgaagcgaataaactgggaagaggcagagagg
aaggaagggaatgaagacgaggaagaagaagtgaatggcggaaacaagtgttggttggtt
tggcaaggaagtattgggaaaccgagttttcataggtttcatgtacacgaatgcgtgacg
gaatccactgccaagaaagttttcatggatgctggtgttgttcactactgggatctcgct
gtcaattactcagacgactaa
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