Arabidopsis thaliana (thale cress): AT1G30480
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Entry
AT1G30480 CDS
T00041
Symbol
DRT111
Name
(RefSeq) D111/G-patch domain-containing protein
KO
K12840
splicing factor 45
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G30480 (DRT111)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G30480 (DRT111)
Spliceosome [BR:
ath03041
]
Complex A
U2 snRNP components
U2 related factors
AT1G30480 (DRT111)
Complex B
AT1G30480 (DRT111)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
CCDC47
G-patch_2
RE_MjaI
Med17
CDC45
Motif
Other DBs
NCBI-GeneID:
839927
NCBI-ProteinID:
NP_174336
TAIR:
AT1G30480
UniProt:
P42698
A0A178W6S6
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Position
1:10790022..10792725
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AA seq
387 aa
AA seq
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MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPAFAPPQTILRPLNKPKPIV
SAPYKPPPPSNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEEYKREKKRK
ATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAAMSGGG
SGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGKSEQGI
TTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVGPGQVDDEL
EDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGRYFGGR
TVRATFYDEEKFSKNELAPVPGEIPGY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtggattatacggagatcttcctccaccgaccgatgatgagaaacccagtgga
aactcctcttccgtctggtcaagcagtaccaaaatggctccacctacacttcgcaaacca
ccagcttttgctcccccgcaaacaatcttaagacctctcaacaaacctaaacctatcgtt
tcggctccgtacaagcctcctcctccttcgaattcatcgcaatcggtgcttattccggcg
aacgaatcagcaccttcgcatcagcctgcattggttggtgtgacttcatcggtgattgaa
gagtacgatccagcgagacctaacgattacgaggagtataagagggagaagaagaggaaa
gctacggaagctgagatgaaacgagagatggataagagaaggcaagaggatgaggaaaga
gataagagagaaagagaagagagggagaaggagagagagagagataacagtgatccgtct
cggttgaatatctccggtgaggaagcgtggaagagacgcgctgctatgagtggtggtgga
agtggtgggaagggaagatcttcgtctccgccggggaatgttgatgggtttagtattggg
aaatcggagacgagtgggttaggagtaggagcaggtggacagatgacagctgctcagagg
atgatggcgaagatgggatggaaacaaggacaagggcttgggaaatcagagcaagggatt
actacgccattgatggctaagaagactgatcgtagagctggtgtcattgtcaatgctagt
gagaataaatcttcttcggcggagaagaaggttgttaagagtgttaatatcaatggtgaa
ccaaccagggttttgcttcttagaaacatggttgggccaggacaagtagatgatgagcta
gaagatgaggtaggaggcgagtgtggcaaatacggtacagtcactcgtgtactgatattc
gagatcactgaaccgaacttccctgtacacgaagcagtaagaatctttgttcagttttca
agacccgaggaaacaactaaagcccttgtagacctcgatgggagatactttggaggaaga
accgtacgtgcaacgttctatgatgaagagaaattcagtaagaacgagttggctccagtt
ccaggtgaaatccctggctattaa
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