Arabidopsis thaliana (thale cress): AT1G31500
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Entry
AT1G31500 CDS
T00041
Name
(RefSeq) DNAse I-like superfamily protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT1G31500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G31500
Enzymes [BR:
ath01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
AT1G31500
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AT1G31500
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AT1G31500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
840040
NCBI-ProteinID:
NP_001077640
TAIR:
AT1G31500
UniProt:
A8MS41
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Position
1:complement(11273573..11276636)
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AA seq
417 aa
AA seq
DB search
MFSSTTLHHLPRPNLLLPRKVISRRMSTNPAIEPKVRKFESVEGVDIGSRNKSDGFFAIP
LYLSKLVALYNCISLSRIGTSNENFVFSGIRFRLVSYNILAQVYVKSALLPHSPPACLKW
KARSHAILSVLKNLQADFFCLQEVDEYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFY
KPSCAELVTKERIEYNDLVDSIKADSVSCSEQKIETSNEGKDSRKDSRDLNDPLVRLKRD
CVGIMAAFRINKPFQHIVIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECT
PSLLLAGDFNSIPGDMVYSYLVSGNAKPTETIEEEEAPVPLSSVYEVTRGEPKFTNCTPG
FTNTLDYIFISPSDFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEIRRE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttctacaactctgcatcatcttcctcgtccgaatcttcttcttcccaggaaa
gttatttcgagaagaatgagtacgaatcctgcaattgaaccaaaagttcgcaaatttgaa
tctgttgaaggagttgatattggttcaagaaataaatccgatggtttttttgctattcct
ctttacttatcaaagcttgtggctttatataactgtataagtttaagtagaattggtact
agtaatgagaattttgtgttttcaggtatcagattccgtcttgtttcatataacatatta
gctcaggtttatgtgaagagtgcacttctcccacactctccacctgcctgtctcaaatgg
aaagctcgttcacatgcaattctcagcgttctcaaaaatctccaggctgatttcttttgt
ctgcaggaagtagatgagtacgatagcttttacagaaataacatggactctctgggatat
tctgggatttatattcagagaaccggccagaggaagcgtgatggttgtgcaatcttctac
aagccaagctgtgcagagttagtcacaaaggaacggatcgaatataatgatcttgtggac
tcaataaaagcagatagtgtttcctgcagcgaacagaagattgagacatccaacgaagga
aaagattctcgaaaagacagtcgtgaccttaatgatccactagtgagactaaaacgtgat
tgcgttggaataatggctgcttttaggatcaacaagccgtttcagcatatcgttatcgtg
gcaaacacacatctttactgggaccctgaattggctgatgtcaagcttgctcaagccaag
tatctactgtcacgactagctcagttcaaaacactaatatcagatgaatttgagtgcaca
ccttcattgctactagctggcgacttcaattcaattcctggggatatggtttatagttac
ctagtatcgggtaatgctaaacccacagagaccatagaagaagaagaagctccagttcct
ctgtctagtgtctatgaagtcacaagaggagagcctaagttcacaaattgcactcctggc
ttcacaaacacacttgactacatcttcatctctccttcagacttcattaaacctgtgagt
atccttcaactacctgagccggattctccagatgttgtcggtttcttaccgaatcatcat
cacccgagtgatcatttacctataggagctgagtttgagattcgtcgggaatag
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