KEGG   Arabidopsis thaliana (thale cress): AT1G31530
Entry
AT1G31530         CDS       T00041                                 
Name
(RefSeq) DNAse I-like superfamily protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AT1G31530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G31530
Enzymes [BR:ath01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     AT1G31530
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AT1G31530
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     AT1G31530
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 TypeIII_RM_meth
Other DBs
NCBI-GeneID: 840043
NCBI-ProteinID: NP_174438
TAIR: AT1G31530
UniProt: Q9C6U7
LinkDB
Position
1:complement(11281188..11282468)
AA seq 283 aa
MASSSLMYVSPPESILWEKRSKAILDNIKNFEADFICLQEVDEYHSFFDRNMEAQGYSGI
PIENKEGYECAIFFKPKFAEFITYQTTRIQGYTKYENLCVAPSSSTVSSESSDVVNAEEL
SVVMVAFKILKPFNHVVIIASSHLKSGKPDRWDDLKLAQVKTLMTELASFKEIISALTNC
SPSVILAGDFNSKPYVHKYINSDNIPSDIDLRSVYEFTKGEPRFTNNVPGFAETLDYMFY
THSEIISPVKLLDSPDEVDFLPNEIHPSDHLPIGVEFEINRNI
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcgtcgtcgtctctcatgtatgtctctcctccagagtctatcctgtgggagaaacgt
tcgaaggcgattcttgataatataaagaattttgaagctgatttcatctgtctacaagaa
gtagacgagtaccatagttttttcgatagaaacatggaagctcaaggatactctggaatt
cctattgaaaataaagaaggctatgaatgcgcaatctttttcaagcccaaatttgcagag
ttcattacataccaaacaaccagaatccaaggatacaccaaatatgaaaacctttgcgtg
gcgccgagtagtagtaccgtaagtagtgagtctagtgacgttgttaacgctgaagagctt
tctgtggtaatggtagcgttcaagattttaaaaccatttaatcatgtcgttattattgca
agctctcatttaaaatccgggaaacctgatcgatgggatgatttaaagctagctcaagtc
aagactctaatgactgaattagcctcgttcaaggagattatatcagcgctaacaaattgc
agtccatcggtgatccttgctggtgacttcaattcgaaaccctacgtgcataaatacata
aattcagacaatataccgtctgatattgatctacgaagtgtgtatgaatttacgaaagga
gagccaaggttcacaaataatgtgccagggtttgctgaaacactcgattacatgttctac
acgcattctgaaattatttctcctgtgaagctcctggattcgccggacgaagtcgatttc
ttacccaatgaaattcatccgagtgatcatttacccatcggcgttgagtttgagatcaac
cgaaacatatag

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