Arabidopsis thaliana (thale cress): AT1G31530
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Entry
AT1G31530 CDS
T00041
Name
(RefSeq) DNAse I-like superfamily protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT1G31530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G31530
Enzymes [BR:
ath01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
AT1G31530
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AT1G31530
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AT1G31530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
TypeIII_RM_meth
Motif
Other DBs
NCBI-GeneID:
840043
NCBI-ProteinID:
NP_174438
TAIR:
AT1G31530
UniProt:
Q9C6U7
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All DBs
Position
1:complement(11281188..11282468)
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AA seq
283 aa
AA seq
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MASSSLMYVSPPESILWEKRSKAILDNIKNFEADFICLQEVDEYHSFFDRNMEAQGYSGI
PIENKEGYECAIFFKPKFAEFITYQTTRIQGYTKYENLCVAPSSSTVSSESSDVVNAEEL
SVVMVAFKILKPFNHVVIIASSHLKSGKPDRWDDLKLAQVKTLMTELASFKEIISALTNC
SPSVILAGDFNSKPYVHKYINSDNIPSDIDLRSVYEFTKGEPRFTNNVPGFAETLDYMFY
THSEIISPVKLLDSPDEVDFLPNEIHPSDHLPIGVEFEINRNI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgtctctcatgtatgtctctcctccagagtctatcctgtgggagaaacgt
tcgaaggcgattcttgataatataaagaattttgaagctgatttcatctgtctacaagaa
gtagacgagtaccatagttttttcgatagaaacatggaagctcaaggatactctggaatt
cctattgaaaataaagaaggctatgaatgcgcaatctttttcaagcccaaatttgcagag
ttcattacataccaaacaaccagaatccaaggatacaccaaatatgaaaacctttgcgtg
gcgccgagtagtagtaccgtaagtagtgagtctagtgacgttgttaacgctgaagagctt
tctgtggtaatggtagcgttcaagattttaaaaccatttaatcatgtcgttattattgca
agctctcatttaaaatccgggaaacctgatcgatgggatgatttaaagctagctcaagtc
aagactctaatgactgaattagcctcgttcaaggagattatatcagcgctaacaaattgc
agtccatcggtgatccttgctggtgacttcaattcgaaaccctacgtgcataaatacata
aattcagacaatataccgtctgatattgatctacgaagtgtgtatgaatttacgaaagga
gagccaaggttcacaaataatgtgccagggtttgctgaaacactcgattacatgttctac
acgcattctgaaattatttctcctgtgaagctcctggattcgccggacgaagtcgatttc
ttacccaatgaaattcatccgagtgatcatttacccatcggcgttgagtttgagatcaac
cgaaacatatag
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