Arabidopsis thaliana (thale cress): AT1G31600
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Entry
AT1G31600 CDS
T00041
Symbol
TRM9
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT1G31600 (TRM9)
Enzymes [BR:
ath01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
AT1G31600 (TRM9)
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
AT1G31600 (TRM9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy_2
RRM_1
Toxin_14
Motif
Other DBs
NCBI-GeneID:
840048
NCBI-ProteinID:
NP_001322355
TAIR:
AT1G31600
UniProt:
Q8RWY1
LinkDB
All DBs
Position
1:complement(11312961..11316582)
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AA seq
346 aa
AA seq
DB search
MVQPRFVRPTQSSPSSISGEPNSSNLYVANCGPAVGLTHNAIAAVFAEFGEVNGVYAADD
SGVRVIVSFADPFSAKAALEALSGRPCPDLKGRSLHIRYSVLQLPSETQVNDCVPVSLID
SELNIPGLFLLPDFVTVAEEQQLLAAVDARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRL
GELPSFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSL
SLAGPCIMEFRRYSVSTWKASTTDAEKSGDSSCIKKALYLPPRSMLLLSGEARYAWNHYI
PHHKIDKVKDKVIRRSSRRVSFTLRKVRNHPCSCKYPQYCDSQQQM
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggttcagccgcgattcgtccgtccgacgcaatcatcgccatcttccatttctggagaa
ccaaattcatcaaatctatacgtcgcgaattgtggaccggcggttggactaacacacaac
gcaatcgcggcggtgttcgctgagttcggtgaagtaaacggagtctacgcggcggatgat
agcggcgttcgtgttatcgtctctttcgctgatcccttctccgcgaaagcagctctagaa
gctttgagtggtcgaccatgtcctgaccttaaaggacgttctttgcatattcgatattca
gttcttcaattaccttccgagacgcaggtgaatgattgtgttccagtgtctttgattgat
tcagagttgaatattccagggcttttcttgttacctgattttgtcactgtggcagaagaa
cagcaattgcttgcagctgttgatgctcgacattggattggtcttgctaaacggcgtgtt
caacactatggatatgagttttgttacgggacaagaaatgttgataccaaaaagcgtctc
ggtgagcttccgtcgtttgtttctcctatacttgaaagaatctatttgttcccgaacttt
gacaacggctcagcaagcttgaatttggaccagttaacggtaaatgagtacccatctggt
gtgggattatcgcctcatattgatacacattcagcatttgaagattgcatattcagcctt
tctttagctggtccttgtattatggaattcagaagatactctgtttccacatggaaagcc
tcaactaccgatgctgagaagtcgggtgactcctcttgcatcaaaaaggccttatatctt
cctcctcggtctatgctcttattatccggtgaagcacgatatgcttggaatcactacatt
ccacatcacaagattgacaaggtgaaggataaagtgatcagaagaagttctagaagggta
tctttcacattacggaaggtgagaaatcatccttgcagttgtaagtatccacaatactgt
gactctcagcaacaaatgtaa
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