Arabidopsis thaliana (thale cress): AT1G35625
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Entry
AT1G35625 CDS
T00041
Name
(RefSeq) RING/U-box superfamily protein
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT1G35625
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT1G35625
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT1G35625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
DUF2306
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
840462
NCBI-ProteinID:
NP_001319153
TAIR:
AT1G35625
UniProt:
F4HZZ4
LinkDB
All DBs
Position
1:complement(13158466..13160284)
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AA seq
318 aa
AA seq
DB search
MNGSWITILSLLVISQLASSKVTLIGKNTFLSFDDVEANFTPVVRRSGEYGLLYAAEPLD
ACSYLTNMAEKGSKFRPSYVLIVRGGCSFEEKIRNAQEAGYKAAIVYNDRYEELLVRMAG
NSSGVYIHGVLVTRTSGEVLKEYTSRAEMELLLIPGFGISSWSIMAITFVSLLVISAVLA
SYFSVRRHRIRQHVRDLHHGGQGHSRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDY
RVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGNDVPPASETTPLISPGPNS
ITSLQSFYDLPIVVRVYL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtagttggattacaatcctctctttgttggtaatttctcagctggcttcttcg
aaagtaacgttgatcgggaaaaacacatttctctcatttgatgatgtcgaagcaaatttc
acaccagttgttagaagatcgggagaatacggattgttgtacgctgcagagcctcttgat
gcgtgctcgtacttaacaaacatggcggaaaaaggttcgaaatttaggccctcgtatgta
ttgatcgtccgtggtggctgtagttttgaggaaaaaataagaaatgcgcaggaagctgga
tacaaagctgcgatcgtctataacgatagatatgaggagctcttagtacgtatggcagga
aattcatctggtgtctatatacatggtgtgcttgttacaagaacatcaggggaggtactt
aaagagtataccagtcgagctgagatggagctcttgctcatcccgggattcgggatttca
tcttggtcaatcatggctatcactttcgtatcgttactcgtcatttctgccgtcctagcc
tcttatttctctgtccgtaggcatcgaattagacagcatgtgagggatttacatcatggt
ggccaaggacattctcgtatgccaaaagacttgttgcaaagcatgccgactgaagtatat
accggtgttcttgaagaaggttcgacttctgttacttgtgctatatgtattgatgattat
cgcgttggtgaaatactcaggatcctaccttgcaaacacaaatatcatgcggtgtgtatc
gattcttggctcggacgttgtagatccttttgtccggtttgtaaacaaaatccaagaaca
ggaaatgatgtaccaccagcatcagaaacaacacctttgatttctcctggtccgaactct
attacttcactacaatcgttttatgatctaccaatagttgtcagagtatatctgtaa
DBGET
integrated database retrieval system