KEGG   Arabidopsis thaliana (thale cress): AT1G35625
Entry
AT1G35625         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT1G35625
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT1G35625
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT1G35625
SSDB
Motif
Pfam: PA zf-RING_2 zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-ANAPC11 zf-RING_UBOX zf-RING_5 DUF2306 zf-C3HC4_3 Prok-RING_4
Other DBs
NCBI-GeneID: 840462
NCBI-ProteinID: NP_001319153
TAIR: AT1G35625
UniProt: F4HZZ4
LinkDB
Position
1:complement(13158466..13160284)
AA seq 318 aa
MNGSWITILSLLVISQLASSKVTLIGKNTFLSFDDVEANFTPVVRRSGEYGLLYAAEPLD
ACSYLTNMAEKGSKFRPSYVLIVRGGCSFEEKIRNAQEAGYKAAIVYNDRYEELLVRMAG
NSSGVYIHGVLVTRTSGEVLKEYTSRAEMELLLIPGFGISSWSIMAITFVSLLVISAVLA
SYFSVRRHRIRQHVRDLHHGGQGHSRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDY
RVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGNDVPPASETTPLISPGPNS
ITSLQSFYDLPIVVRVYL
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaacggtagttggattacaatcctctctttgttggtaatttctcagctggcttcttcg
aaagtaacgttgatcgggaaaaacacatttctctcatttgatgatgtcgaagcaaatttc
acaccagttgttagaagatcgggagaatacggattgttgtacgctgcagagcctcttgat
gcgtgctcgtacttaacaaacatggcggaaaaaggttcgaaatttaggccctcgtatgta
ttgatcgtccgtggtggctgtagttttgaggaaaaaataagaaatgcgcaggaagctgga
tacaaagctgcgatcgtctataacgatagatatgaggagctcttagtacgtatggcagga
aattcatctggtgtctatatacatggtgtgcttgttacaagaacatcaggggaggtactt
aaagagtataccagtcgagctgagatggagctcttgctcatcccgggattcgggatttca
tcttggtcaatcatggctatcactttcgtatcgttactcgtcatttctgccgtcctagcc
tcttatttctctgtccgtaggcatcgaattagacagcatgtgagggatttacatcatggt
ggccaaggacattctcgtatgccaaaagacttgttgcaaagcatgccgactgaagtatat
accggtgttcttgaagaaggttcgacttctgttacttgtgctatatgtattgatgattat
cgcgttggtgaaatactcaggatcctaccttgcaaacacaaatatcatgcggtgtgtatc
gattcttggctcggacgttgtagatccttttgtccggtttgtaaacaaaatccaagaaca
ggaaatgatgtaccaccagcatcagaaacaacacctttgatttctcctggtccgaactct
attacttcactacaatcgttttatgatctaccaatagttgtcagagtatatctgtaa

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