Arabidopsis thaliana (thale cress): AT1G35630
Help
Entry
AT1G35630 CDS
T00041
Name
(RefSeq) Protease-associated (PA) RING/U-box zinc finger family protein
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT1G35630
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT1G35630
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT1G35630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
Citrate_bind
Motif
Other DBs
NCBI-GeneID:
840463
NCBI-ProteinID:
NP_174800
TAIR:
AT1G35630
UniProt:
F4HZZ5
LinkDB
All DBs
Position
1:complement(13162966..13164512)
Genome browser
AA seq
318 aa
AA seq
DB search
MNYSWITIMSLLVICKLASAKVVLIGKNTILSFDDVEATFTPIVRNSGECGILYVAEPLE
ACSDITNMAEKRSKYRSSYVLIVLGGCSFEEKVRKAQKAGYKAAIVYNDGYDELLVPMAG
NSSGVDIHGLLVTRASGEVLKGYADQDEMKLWLIPGFGISSWSIMGITFISLLAMSAILA
TCFVVRRHQIRQSVRDLPHGGQGLSCMPRDLLQSMPTEVYSGVLEESSTSVTCAICIDDY
CVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGNDVPPASETTPLISPSPNS
ITSLQSFYDLPIVVRVYL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaactatagttggattacaatcatgtctctgttggtaatttgtaagctggcttcggcg
aaagtagtgttgatcgggaaaaacacaattctatcctttgatgatgtcgaggcaactttc
actccaattgttagaaactcgggggaatgtggaattttgtacgttgcagagcctcttgag
gcatgctcggatataaccaacatggcggaaaaaagatcaaagtataggtcctcttatgta
ttgatcgtccttggtggctgtagttttgaggaaaaggttagaaaggcgcagaaagctgga
tacaaagctgcgattgtctataacgatggatatgatgagctcttagtacctatggcagga
aattcatctggtgtggatatacatggcttgcttgttacaagagcatcaggggaggtgctt
aaagggtacgcggatcaagacgagatgaagctttggctcatcccgggattcgggatttca
tcttggtccatcatgggtattacattcatatctttactcgccatgtctgctattctagcc
acttgtttcgttgtccgtaggcatcaaattagacagagtgtgagggatttaccacatggt
ggccaaggactttcttgtatgccaagagacttgttgcaaagcatgccgactgaagtatat
agcggtgttcttgaagaaagttcaacttcggttacttgtgctatatgtatcgatgattat
tgcgttggtgaaaaactccgaatcctaccttgcaaacacaaatatcatgcggtgtgtatc
gattcttggctcggacgttgtagatccttttgtccggtttgtaaacaaaatccaagaaca
ggaaatgatgttccaccagcatcagaaacaacacctctgatttctcctagcccgaactct
attacttcactacaatcgttttatgatctaccaatagttgtcagagtatatctgtaa
DBGET
integrated database retrieval system
