Arabidopsis thaliana (thale cress): AT1G43860
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Entry
AT1G43860 CDS
T00041
Name
(RefSeq) sequence-specific DNA binding transcription factor
KO
K14574
ribosome maturation protein SDO1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT1G43860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT1G43860
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
AT1G43860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_domain_II
SBDS_N
SBDS_C
DUF4629
HTH_70
Motif
Other DBs
NCBI-GeneID:
840982
NCBI-ProteinID:
NP_001322379
TAIR:
AT1G43860
UniProt:
A0A1P8ATX3
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Position
1:complement(16620769..16624504)
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AA seq
335 aa
AA seq
DB search
MRFESKCLCREKDIDEVLQSHTVYSNVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGEL
QVAGKERESQFSSQFRDIATIVMQKTINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQ
ALDVIRELQKHFPIKRSPMRLRLTVPVQNFPSLLEKLKEWDGSVVSKDESGTQMSTVCEM
EPGLFRECDSHVRSIQGRLEILAVSVHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKD
LTDPVVELSKKLQKQEISTTDNIKQEGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKH
NLKRKTRKLPPISADECMSEIDMDDSRADLKDYSF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgagtcaaaatgtttatgcagggagaaggatatagatgaagtgctacagtcg
catactgtttattcaaatgtttcgaaaggagttcttgcaaaatcgaaagacttgatgaag
tcgtttggatcagatgatcatacgaaaatatgcatcgatattttggagaaaggagagctt
caagttgctggaaaagaaagagaatcacagttctcaagccagtttcgggatatagcaacg
attgttatgcagaaaactatcaaccctgaaacacaacgaccttataccatcagcatggta
gagcgcctaatgcatgaaattcattttgctgttgatcctcatagtaattccaagaagcag
gcacttgatgtcatccgtgagctgcaaaagcacttccctataaagcgttctccaatgaga
ctgcgtcttactgttcctgttcaaaatttcccctcgcttctggagaagctaaaagaatgg
gatggtagtgttgtctccaaagacgaatctggaacacagatgtccactgtctgcgagatg
gaaccgggcctattccgagagtgtgattcccatgtgaggagtatccagggaagactagaa
atactcgctgtatcagttcatgcagaaggtgacacaagcatggatcattacgatgagcat
gatgatatggcattgcaaacccacaagccgttgttacctgctgagactgagactaaggat
ttgaccgatcccgtcgttgaacttagcaagaaactgcagaagcaagagataagtactaca
gataacataaagcaagaaggtggagaagaaaagaaggggaccaagtgcagcacttgcaac
acgttcgttggagaggctaagcaatacagagagcactgtaagagtgattggcacaaacac
aaccttaagcgtaagactcggaaactccctcctattagtgctgacgaatgcatgtctgag
attgacatggacgactctagagcagatttgaaagactactctttctga
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