Arabidopsis thaliana (thale cress): AT1G45233
Help
Entry
AT1G45233 CDS
T00041
Symbol
THO5
Name
(RefSeq) THO complex, subunit 5
KO
K13174
THO complex subunit 5
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G45233 (THO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G45233 (THO5)
03041 Spliceosome [BR:
ath03041
]
AT1G45233 (THO5)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AT1G45233 (THO5)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AT1G45233 (THO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
841093
NCBI-ProteinID:
NP_973979
TAIR:
AT1G45233
UniProt:
F4HRC1
A0A5S9WPI2
LinkDB
All DBs
Position
1:17152896..17154843
Genome browser
AA seq
452 aa
AA seq
DB search
MQSEMAIDTVATAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFI
NLRQANRSILIEEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPN
IDLISEQDFFSDAPEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLL
ESNAERNKFLSSLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFM
ALKEAFEENIDVEVSGSLKDAQTYARQQAEQNSESLRLEVGVDEERQRKRLKKVGSDEGG
VYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNILCNLF
PDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDKDIQYSD
TAKGYASASDHRNVQTVLQRIRSQKKTKLTLV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggagatggcgatagacacggtggccacggcggagaaatcaccactagagcta
cttcaacaaaccaaagcctccgtcgaagcaatcatagcaaagatgctctccatcaagcaa
caaggaacccctaaatccgagaatcgagaactcctcactcagatgtttctcaacttcatc
aatcttcgtcaagcgaatcgctcgattcttatagaagaagagaaagtgagaacagaaacg
gaaatagcaaaatctccggtggatttcacgacgttggagcttcacaatctcatgtatgag
aagagtcattacctcaaagctaataaagctagtagagatttcaaatctaggtatccaaac
atcgatctcatatccgaacaagacttcttcagtgatgctcccgaagcaatcaaatctcaa
acgttatcaaatgatagttctcatgatttgatgcttaaaagactcaattttgagcttcat
cagaggaaagagctatgcaagcttagagtgaggttggagcaacagaagaagagtttactt
gaaagtaatgcggagaggaacaagtttctgtcaagtcttccagtgcatctcaaatctcta
aagaaagcatctttgccagtacagagccagttgagtttgcagaatcagaagaagctgaag
tatcataatctagctgagcttcttcctccgccgctttatgttatatattcgcagttcatg
gcactgaaggaagctttcgaagagaatatcgatgttgaggtatctgggagtcttaaggat
gctcaaacttatgcgcggcagcaagcagaacagaactcagagagtctaagattagaggtt
ggtgttgatgaagaaaggcaaaggaaacgactcaagaaagtgggttctgatgagggagga
gtatatcaagttcatcctcttaaagttgtccttcatgtttatgatgacgagattacagat
ccgaaatctcatgaacttgtcatgctcaagtttgagtacttgttgaagttgaatgttgta
tgtgttggcattgaagagtctgaggatggacttgagaaaaatatactatgtaacttattt
ccagacgattctggacttgagcctcctcatcagtcagccaagctcattcttggcaacgat
catgtgtttgataaaagcagaacttcgaggccatataagtgggcacaacatttggcgggg
attgagactttacctgaaatgtcaccattttttactgacaaggatattcaatatagtgat
acagctaaaggctatgcttctgcttctgatcaccgcaatgtgcaaaccgttctgcaaaga
atacggtcccagaaaaagactaagctaacgcttgtgtga
DBGET
integrated database retrieval system
