Arabidopsis thaliana (thale cress): AT1G48360
Help
Entry
AT1G48360 CDS
T00041
Name
(RefSeq) zinc ion binding/nucleic acid binding/hydrolase
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
AT1G48360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G48360
Enzymes [BR:
ath01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
AT1G48360
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
AT1G48360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
NatB_MDM20
TetR_C_40
ADAM17_MPD
Motif
Other DBs
NCBI-GeneID:
841256
NCBI-ProteinID:
NP_001117447
TAIR:
AT1G48360
UniProt:
Q5XVJ4
LinkDB
All DBs
Position
1:17868522..17873261
Genome browser
AA seq
891 aa
AA seq
DB search
MLTGRESLLRLIGKRRRFLPNRHLLLSAHTPNSLNLEFNDYGNLVSLAGDDCRLSEDPTS
SDDPSKFSDDLSLSTRKKRRLTQTTLLQSSFLSVPKQLEDGLVICTQQKSILDSETFEFS
LVQRSEPSESICCKVEDGSCSPSREESLKTVTLDEDNGEAIETFIVGRKFSDVQDLEIGG
DIFLLRHPENVKDRNAIKVISGDSEMLGYLPKDISQCLSPLIDDYDLKFEGTITSVPKKS
SEAVLIKVVCHKMRSDGWKECELYGDFKPLWEKVLQVVEHQMQFPPKTTRYQLNFNVLLQ
EVLRSCSHLFTADEKAFLESFPTLSEDSQRLFIRLYTRKGPWFRLSNISYPEVTDSLQAL
KDLTVRGFMSSVKDANELDNQKMKEITELLNVTELRDILSMNKVFSRTSRKRDLINSLCS
CYNDGTRINLATVILERTGLCAKVSSTAESLIWRVERLFFLNGEQDLSSFVLLDLGIIKY
PTYKCIDSEQIFSNRTKLLAYEEAIEVAQLMDESLDNEDPQTVLKCIIIAETRISSSSLD
SAHAAAFNRFTAPWVNSKVVLLGVSFFENQKRYNRAVYLLRRLLSCFNCDGRRGYWTVRL
STDLEHMGRPNESLTVAEQGLLDPWVRAGSRVALQRRILRLAKPPRRWKTPTFSNLVDNK
IPEVTIQGRSLNCEVGIKNRFYGEDGEQCGVEQLALQYYSGEGGGWQGIHTESSIWLTIF
GLLMWDILFSDVPGVFQTRFQTAPLDLETESFYLTRKETIESQLEKVANGMAEEILIISY
ETQRGTACRGVAWERFSLEELRAAVACVGGMCIASLCRHLAQDYRSWCSGMPDLLVWRFK
ENGYEGEAKLVEVKSEKDRLSEQQRAWLLLLMDSGFNVEICKVRPASLIKT
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccggacgggagagtttgctccggttgattggaaagcgccggcgatttctcccc
aatcgccaccttcttctctccgctcatactccgaattcgttaaatctcgagttcaacgac
tatggcaatcttgtctcattagccggagatgattgtcgtttatcagaggatccgacttct
tcagatgacccgagtaaattctctgatgatttgagtttatccacgaggaagaaacggaga
ttaactcagaccactcttcttcagtcaagtttcttgtcagtgccaaaacaattagaagat
ggtcttgtaatttgtactcagcagaaatcgatactcgattctgaaacttttgaattcagt
ttggtgcaaagaagtgagcctagtgagtctatttgctgcaaggttgaagatggttcatgt
tctccaagtagggaggagagtttgaaaactgtgactttagatgaagacaatggtgaggct
attgaaacctttatagttggtaggaagttcagtgatgttcaggatttagaaattgggggt
gacatttttcttttgagacatcctgagaatgtcaaagatcgaaacgctataaaggttatt
tctggagactctgaaatgcttgggtatctacctaaagatatatcccagtgcttgtccccg
ctgatcgatgactatgaccttaagtttgagggaacgataacatctgttccgaagaaatct
tctgaagctgttctgatcaaggttgtttgtcacaagatgagatctgatggttggaaggaa
tgtgaattgtatggagattttaaacctctttgggagaaagttcttcaggttgttgagcat
cagatgcaatttccgcctaaaacaacaagatatcagttgaacttcaacgtattactacaa
gaagttctaagaagctgctctcacttattcacagccgatgaaaaggcattcttggaatct
ttccccacactttcagaggatagccagagacttttcatccggctttacacacgaaaagga
ccttggtttaggctatcaaatatatcataccctgaggtgactgattctcttcaagccctg
aaggatctgacagtcaggggatttatgagttcagtgaaggacgcaaatgaactcgataac
caaaagatgaaggaaatcacagagttgcttaacgtcactgaacttcgtgatatcttatct
atgaacaaggtgttcagtcgcacctcaagaaagagagaccttattaattctctttgttct
tgttacaatgatggaacgagaataaatctagcaacagtaattctagaaagaacaggacta
tgtgctaaggtatcaagtacagcagaatctctcatatggcgcgttgagaggcttttcttc
ctcaatggggagcaagatctatcgtcttttgttctgctggatcttggtattatcaaatac
ccaacttacaaatgcattgactcagagcaaatattctcgaatcggaccaagcttttagca
tatgaagaggccattgaagtggctcagttgatggatgagtctcttgacaatgaggatcct
cagacagtgttgaaatgcattataattgctgaaacccgcatatccagttcctctttggat
tctgctcacgctgctgcatttaatcgctttacagctccatgggttaactcaaaggtggtt
ctcttaggagtttccttttttgagaaccagaagaggtacaaccgagcagtttatctactg
aggcgattgctcagctgttttaattgtgatgggagacgaggatactggacagtcaggtta
tcaacggatttggagcacatgggacgtccaaatgagagtcttacagttgcagagcaggga
ctattggatccttgggtgcgtgctggttcaagggtagctttgcaaaggcggattcttcgt
ttggcaaaacctccaagacgctggaaaactcccactttttcaaatctcgtcgacaacaag
atccccgaggttactattcaagggagatcactgaactgtgaagttggcataaaaaatagg
ttttatggagaagatggagaacaatgtggagtggagcagctcgcattgcagtattacagt
ggagaaggaggaggatggcaaggaattcatacagagagtagtatctggttaacgattttc
gggcttctcatgtgggatattctattttccgatgtccctggcgttttccaaacccgattc
cagactgctccactggacttagagactgaatccttctatctaaccaggaaggaaacaata
gaatctcagctcgaaaaagtcgcaaatggaatggctgaagaaatactaatcatatcatat
gaaacacaacgtggaacagcgtgcagaggagtggcttgggagcggttttcgttagaggaa
ctgagagcagcagtggcttgtgttggaggtatgtgtatagcatcgctgtgccggcattta
gctcaagactataggagctggtgcagtggaatgcctgatctactggtatggcggttcaag
gagaatggttatgaaggtgaagctaagcttgtggaagtgaaatcagagaaagataggtta
tcagaacagcaaagagcttggcttctacttctaatggattcaggctttaatgttgagatt
tgcaaagtaagacctgcttctttaattaaaacttaa
DBGET
integrated database retrieval system
