Arabidopsis thaliana (thale cress): AT1G48790
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Entry
AT1G48790 CDS
T00041
Symbol
AMSH1
Name
(RefSeq) associated molecule with the SH3 domain of STAM 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT1G48790 (AMSH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ath01002
]
AT1G48790 (AMSH1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G48790 (AMSH1)
04121 Ubiquitin system [BR:
ath04121
]
AT1G48790 (AMSH1)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
AT1G48790 (AMSH1)
Peptidases and inhibitors [BR:
ath01002
]
Metallo peptidases
Family M67
AT1G48790 (AMSH1)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Others
Others
AT1G48790 (AMSH1)
Ubiquitin system [BR:
ath04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
AT1G48790 (AMSH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
pre-PUA_NIP7
Motif
Other DBs
NCBI-GeneID:
841301
NCBI-ProteinID:
NP_564533
TAIR:
AT1G48790
UniProt:
Q8VYB5
A0A178W2J9
LinkDB
All DBs
Position
1:complement(18043672..18047806)
Genome browser
AA seq
507 aa
AA seq
DB search
MGSSFETIDIATSARRIGVDNRISLKFYFRIADNILKQANIFRAEKNVIDLYVMLLRFSS
LALETIPSHRDYRTSLKSNKEYLRMRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQA
HPANGSLGWSSAVKPSFNSYDHAKVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVNF
RPNEETLSKHSILGPGGLSAQWQPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMITNG
SNDEPEKPIVEPSVASNEKIQKNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAEVQD
LVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFMRLAKSNTKKNLETCGI
LAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQSCFM
SSIDVHTHYSYQIMLPEAVAIVMAPQDSSRNHGIFRLTTPGGMTVIRNCDRRGFHAHSSP
EDGGPIYNTCKEVYMNPNLKFDVIDLR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcttttgagaccatcgatatcgctaccagtgctcggagaattggcgtagat
aatcgtatttctctcaaattttacttcaggatcgctgataatatcctcaaacaggccaac
atatttcgggcagagaagaatgttattgatttatatgtcatgcttctgcggttttcaagc
ttggctctcgagactataccgtcccatcgagattacagaacatctctaaaaagcaataaa
gagtatttgagaatgagactactagatgtcttgacggagctggagaagttgaaaccagtt
gtacagcaaaggattgatgaactgtatcccaagctcaaacctcgatataacgttcaagct
catccagcaaatggttccctaggctggtcttctgccgtgaaaccgtcatttaatagctat
gatcatgcaaaggtaagaaatcctcctggacataattctggctacatgggttccaggggt
cagcaatttttgaacgctgcaccacttgaagagcgtttccgaaagatgtcggtgaacttc
cgaccaaatgaagaaaccctttccaagcattctatcttgggtccaggtggactctctgca
cagtggcagccaccaaagtatgatacaaaggttcaatatccaagcaatatagatttttcg
cctgttgtaatcccaagcttccaacaacttgtggacagcaaaccaatgataacgaatggc
agtaacgatgaacctgaaaagccaattgtggaacccagtgttgcatctaatgaaaaaatc
cagaaaaattacactgaagagctttcttccatgatttctttcgaagagccagaaagcgtt
aatgagaacaatctcattaggcaaccttcaccacctccagtgctagcagaagttcaagac
ttggttcctgctttatgtcctgaagttagagaaccggaatgtatgatagaaaactctctg
ccggatgagtctctacggtcggagtctcctcttgaacttcatattgcgacttcaatgatg
gatacctttatgaggcttgccaagtcaaacactaaaaagaatttagagacgtgtggtatt
cttgccggttcactaaaaaacagaaaattttacattacagctctcatcataccaaagcag
gaatcgacatctgactcgtgtcaggccacgaacgaagaagagatatttgaagtacaggac
aagcaatcccttttcccactcggatggattcatacgcatccgacacagtcttgtttcatg
tcatccattgatgttcacacacactattcataccagattatgttaccagaagctgtggca
atcgttatggcgccacaagactcttcaaggaatcacggaatatttcggctgacgacgccg
ggaggaatgacggtgataaggaattgtgaccggcgtgggtttcatgcgcacagttcaccg
gaggacggagggccaatttacaatacctgtaaggaagtttacatgaacccaaatctcaag
tttgatgtcattgatctcagatag
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